SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12168_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_protein_suppressor_of_forked_[Papilio_xuthus]
Ontology
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005848 C mRNA cleavage stimulating factor complex
GO:0006379 P mRNA cleavage
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0016070 P RNA metabolic process
GO:0031123 P RNA 3'-end processing
GO:1903220 P positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity
Transcript
Level		FPKM:9.51 TPM:9.57
ORF EntryO_BomoSK10361_complete:A_BomoSK_comp12168_c0_seq1
Sequence
(Nucleotide)
GTTCATTTCACAATACAACGCGCCGTCTACTTGACGCGCTTCTGCTGCCGCTGCCTGTAT
ATGTCGTTGACCGGGGGCGCCGTGCCCAGCTCGTCGTCGTCAGAGTCGTCGCCCAGCTTC
CTGCGCCGGACCTTATTGGAGATGGCGGTGACGCCGTCGTCGTCGAACAGCCAGTGCACG
GAGCGCGCCATCTCGAACAGCCGCGTGTCGCAGCCGTTCTCCGCGGAGGGCGCCGGCACT
TTATCCGGGAGCGATATCCTGTTGAAGAGCTGCATGAGCCGGTCCACCGCCACGAAGGGT
CCCCGGAAGCAGTTGGGCGGCGGCAGCAGCGTGCACACGTGCGCCGCGCTCGACGGCAGC
GGAAACGCCCCACCTGGTATGGGGTGCTCCCCGGGTAGTGGGTTCGACTTAGGTTTGTAC
GGAATCATTTGGTTGGTGTCCGGACGCGCAATGTCTTTGTTAGGATCGTTGTCTCTCTGC
CCCAGGATGACGGCCGCCAGCTCCGGCGAGATCCCCGCCAGCGGCCCCCCGAGGGCCCAC
GACTTGTTCGACATGGAGGCCACCTCAGTGTACCCTATAGACTTCAGCTCGGCGATGCTG
CACGGGTACAGGTCGAGGAACTTGTATCTGTCCACCAGCTGGGCCGTCTCTTTGCCTTCG
AATTCTTTTATCTTCTCGAGCACGCCCTGCCGCCGCTTCTCGACTTTGACAATGCTGACC
AGGTCCCCGATGTTGGACTCGAACTCCAGGAATCTGTTCCATATGTCGACTGAGTGCTCC
GGCCTCAGGCTGCCCGAGGACAGCACCCGCTCGAACAGAACCCTCGTGTTGTTATCCTCG
TTGAGATGGGACAGGTAGTCGATGTAGCAGAGCACGTACTCCGGGATGTGGGAGAACTTC
TTGAGGCCGAGCTCGAAGATCCTGAAGGCTATGTTCTTGTCCTTGGAGCAGTAGTACTCC
ATGAGCGCGGCGGCCACGAACACGTGGTACCGGGACCTCTGATCCTCCCGGGCCCTCTTG
AAGACGGTCCTCGCAGACTTGATTCCCTCCGCCCTCCTGGCGAACTTCATGTACTGTACA
TAGGCCAACGTGGGGTCGATGTCCTCTGTGTCCAGGTAGCGCGTGTAGACCTGGTGCACC
TTGTGGTAGTGCAGCCTGCTCTCCTCGTAGTCTGCGTGTGCGAAGTGCAGCAGCGTGGAG
TGTTTGAGGGGGCCGCTGGTGGCGCGCTCGTACACCGCCGCCGCCTCGTCAGAGAACAGC
CGGGACGCGTTCGAGTCCCCCTTCTCCTGCAGCAGCTTGGAGGAGTGGTCGAGGAACTGC
GCGGCCTGGTGCCACACGTCCGGGTGGTGCGCCAGACACAGCAGGCACTGCTCGATGGCG
AACATCACGCGCCGCGCCACCAGCGCCGTGTCCTCGGAGCGGAGGGGGTTCGCGCGCTCC
CACGATATGTACTTCTTCCATAACTCCACCTGTTTCATCTCCTCGCGGTCGACGGTGGGC
GGCGTCGCGGGCATGTTCCTATTGAGTCCCCGGGTGACCGTCTCCAGCTCCTTGGAGACT
CGTCTCGCGTTCATGTACTCCCGGGAACGCTCCATGGCCATCCTTTCGGCGATTATCGGG
TTGATGCTTTGCTCGAAGGCTATATAGTCTTTCCACAGCGTCTCTATGCCTATTATGGGC
GTTATGACCGCTCTCTGATAGATCTTTCGAACGGCGGATATCTTCTGGTTCTCGGCGTAT
GAACCAACGGCTTCGACACTCTTCAGAAACGTCACGTAGTCGTTCCATATTGGGTAAGCG
TGGATGTCCAGACCTATCTTGTCCAGGGCGAAGTCGTAGGCCTGCGCCATTTTCTCCTTG
TAAGTGGGTAGCATGCACTTCGTCTCCTTCACGTAGTTCAGGTACAGCCTCCAGAGTTCG
ATGTTTAATATCTTCATCAGACACCTCTGGAAGAGCTTTTCGACTCTTTCAAAATTTCTC
GCTTTCATCTCCTGTTCGATATATATTTTCCAGTAACGTCCTGTGGTCGGGAATGCCGTT
ATCAACTTCTCGTACATGGTTCGGACATCGTTGATGTTTCGGGCCTGGGCTTCTCTTACT
AGCAATGACCAAGAGTCCACATCGTATATGTTGGCTTCGACTGCACGCTGGGCGCGGGAT
AGGCGTTCATTACCCCAATCAATGTCGGCGATTTCATCTACAGATGCCATTTTGAAGTTT
ACGTTTGAGGTTATCTATCTGGTTTTAAGTCCGAGCAACAGTTTTTCGAAGAACTAAGTA
AATGAGGTACTGATTGTTTGTGGACACATTACTCTCAGTGTTAAAATCGATTTAAAACAA
TAAAAAAACACAATTTTCTTTAAAAAATTAAACAACTCAACCAAGCTCAAACGGGATTAG
CGGACGCTATAGATTAT
(2417 bp)

- SilkBase 1999-2023 -