SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12157_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		Luc7-like_protein_3_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:7.84 TPM:7.88
ORF EntryO_BomoSK10343_complete:A_BomoSK_comp12157_c0_seq1
Sequence
(Nucleotide)
GTTAACTTTTATTTGTTTGAAATTAGTCCTACTCACACTTTACTATCCAAAGAAAAGAAT
TAACAAACATTAGGATGAAATAAAAATGTCATAAATACCTGAAACACTCCTCATTGGAGA
CTCGTTTTAGGAATGAGTGACCATCCTAGGGATCGAACAATTTGCAGAGGTAGCTACATG
TTTACATTATTTATAGACAATAATCTAAATCTTCACTTCTTACACACTTCAATAGAGGAT
TTAAAAAAATTAACAGCTACATAATCTTGTTTGAAAAGAAGTGTGGAAGAGGCGGATTAA
AGTGCCCATCTGAATATAGACGACATGCATTGCATCTAATGTTTGGAAGGTTCACTAACA
TCGAAATTATCTTATAATTATTATAATATGACTATCCTAGGTCACCTCGAGACAGATGGT
CGATTACTGCACTGGTTGAACTCTTCGCGGGGGTGTCTTAATTTCATAAGTACCTCATTG
TCTGTGGTCCTCTCCGAGAAGCCGGCCATCTTCCTTCATATTTTCCCCACTGAAAAGTCC
ATGGAGGAAGCTAGTAAAGGTAGCTTGAGTAGAGCTAATGTGGAACTGATCAATCAATGA
AATTAACCCCAGAGAGGGCTCCATAAATATATATATATATATTTGTAATCAGTGGACTTA
ACTTGTTAATCATTGATTTTTCATTTCCACTTTGGGATTGGGGTTATTATTAGTTCAGTA
TTATGACGTCATATTTCGGTTCTTGCAATTTAAAGAATATTTGATTATTGATTCATTCAT
GCTATGTAATTTTATAGAAATATGACATCACTATATTTGGGTACCTGGAAATACATGGTA
GATGTGAACACAGCATCCAATATTGTGAAAGAAGCACAACAGTGCGCTCTTCAAGACTCC
TTTAAATGGCAGTTTTATGGTAATTTTCTATGTTATAGTGTTTAAATTAAGAAATATTTT
GGACTTTTCAAGTATTAGAACAAAGTTTCATGTATTTCAGAAATATATTGAGAATGGCAT
GAGCATTTGTTTTTTCCTCGTTAGTGGGATAATTTGAGCGATTTTTTAAAATTATATTTA
ACTTTAAGTACCTACAATATATAGGTATTACCTATATCAATTTATGGTCGCCATTAGATG
TATTCATATCATAAAAATGTTCGGTATGGAATAAAATTGGACCCTATTTCAGAATAGAAT
TAATTGTCTTCATTGTTGGACACAAGTACCCTAACAAATACCTGGCATCGCATTAGCGAC
GGGCGCCAGACGACTCTCACTCGCGACGACGAAACACGACACGCTGATATACCTCAAAAA
TAAATAACGACAACGAAGCGACCTGCACACGGCTGAGAAGATCTTATTCGTAAATCGTTC
GTTGCCTCCGTGGCACACGCGAACAACGATTAACAAATAAGTTCTCTAGCTCTCGGCTCT
CGGAAACTATTCAAAATACCAATCAAATCCCTGCCATGTCCGCCGGTGTGACGACAACTA
CGTTACAGAGAGTGCAACGGGGTCATTTATTCCCGATATGTATGCCATATACCGAAGTTA
TATTTTGGTATGCTACACATTAAGCTGCAAAACAACATTGTTCACTTTATTACTTATTGT
ATTAACAGTCGGCGGATGTTGAAATAAAAGAAAAAGAAAAAAAAAACATGAGTGATAAAA
AAATAATCGGACTGTATGGCATAAGATGGATTGATTGTGTGTCGTATCCGGACGTCGCGT
ACTGTTAAATTGATTTATTATACTTACCGGATCGAGGTGCTTTTGTGATACCTCAGTCAA
GTGCTAGTGGCGATCTCGAGATCGACGACGGGAGCGCTCGTGAGACGACCTTCTTTCTTT
ACGATGTTTTCGTTCCCGGTCGCGATCACGTTCACGGTCCCGATCCCGCTCTTCGTGGCG
GCCGCCTCGCTCGTCTCGACTTGATCGATCGCGATGTCGGTCCCTCTCACGTTCTCTGTC
CCGTTCCCTCTCGCCTCTCTCGCTTCGTTCGACGCGATCGCCGCGTTCTCCTCCGCGTTG
TTCACCGCGTTCTCCCCGTTGGTCACTACGTTGGTCGCCGCGGTCTCGCTCCCGCTCTCG
ATCGCGTTCCATGCGTTCTCGATCACGGCGATCGGATCCGAGTCCTCCAGAACGAGTGTT
TCTTTCTCTTTCCCTCTCTTCACGACGCCTCTTCTCTTTTTCTTGTTGTTCTTTCTCACG
AGCTTCGGTCATGTCTTCGTAAGCTTGGCGAAGTTTGAAGTATCCAACATGCTGTTTCCC
AGACAAGTGATCATCGATTCTCTGTTGAGCGTCGCCAACAATAAGAAAGGCTCCGCATAC
AGGGCAGACTTCCATTTGTTTCTCCTGAGCAGCTGCTAGTTCAGCTGTCATAGACCAATG
GCTATTTTCTTGTTGTTTAAGCAGCTGTTCTTTTTCTTCCTTGAGCCTGTCACAAAGCTT
CATCAAACCCTGGGCTTGCTCTACATCTCCTCTTATACCCGCTTCTTCAGCTTCTTGTAC
CAAGCCCGTAATTTTTTCAGACAGCAACGAAACCTGTTCCTGATTCTTCTCAGTCTGTGC
TTGAGTCATTGGTGGGCCCTCTGGTTTTGAGTTCATTAGATCCAATCTTTGTTTTCCTTT
TTGTATTTTCCTTTCTACATCATTAATCATATGTTTACAGAACCGTAGAAACTCTTCGAC
ATACTGAGACTTCTTATACGATGGGTCGGCTTTCTCAAAAAGCTCTTTGACTTCTTCATC
GTGGACTTTAGGACAAGCACCAAGATCAGCTCTAGTATTAACGAACAGATCATGCGGACA
GAACTTTACCATGTAGTATTTGCAGTACTCAGGATCTTCCCAATTAGGCTTTTTAATTTT
TTCGTTGGGATCGGTGTTCCGGTGCCTGCCCATCAATTCATCTAGGAGTTGTGCTGCCGC
TAGCACCGCCATCCTACTTTTTAACGCTTTCTAGAACTTCAGACACAACAATAATACATT
AAACTATGGAGTATAAAAATCTTAATTAGTTTAAATAAAACTAGTTGCCAATACGAATCA
AAACGTATTAATTTCTCATCACATTTAACATCAAATAAAAAACGAGAAATGTT
(3113 bp)

- SilkBase 1999-2023 -