SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12148_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_serine--tRNA_ligase,_mitochondrial_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0044822 F RNA binding
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
Transcript
Level		FPKM:6.23 TPM:6.27
ORF EntryO_BomoSK10326_3prime_partial:A_BomoSK_comp12148_c0_seq1
Sequence
(Nucleotide)
TTTTTTTGTAGTTTGCTGTTTGTTTGATTTGAAATGATTTGATGTTTGATCTTCATTATA
TGAAGATCTCAGGTTTTAAATAAGTACTTTATTTTAAAATATGCCACTAAAAATGACACA
TACTACGTTAAACTAAGTGTGCTGTTTCTTCATCTGCCTCTTGGTACCTAGTTTCAAATT
ATCATTGTTCAAGTCCCTTGATTGGTAATATTTTACTTCAGTTAAAATGCTATACATCTC
TTCACTAATTCAGAATTACCGTATTGTCTACAGCACCAAAGGCTTTAAAAGATTTTTCTC
ACAAATTTATCCCAATTATAACTTACAATATTATTGTAATCCCAAAAATCATGAAGAAAT
AAAACAAAATATCAAAATACGAAAAGGAGTAGGAGATATCGATAGAGTAATGCAATTGTA
TAAAATTATCACAAAAACTTCTGAGGATAATCATGAATACGAAAGAATAAAGCAGGATTT
ATATGAAGCGCTAAGTATCTTACCAAATAAAACCCATCCTTTTGTAGAAGGAAAGTTTGA
ACCTCACATTGTCCATGAAATAAATAAAAAGAAAGATTTTGGAGAATACAAGCCTTTTGA
ATTCAGTGAAATAACAAGATTATTAAATTTAATGAGAATCGAGAAGCTGGGACACACCTG
TGGTCATAAAAGTTATTACTTTTTTGGAGAACTAGCAGAATTAGAGGAAGCATTAATAAA
ATACACAGTAAAAAAATTACTTGATGACGGTTTTCAACTGATATCAGTACCTGACATCCT
TGCTAGTAATGTTTTGGAGAGCTGTGGCATGTCTGTAAAAAGCGACAGAACACAGATTTA
TTCACTTGATCCACACCACCATGGAACTGACCTTTGTCTTTCTGGTACTGCAGAAATGTC
TCTGGCTGGATTACTTGCAAACAGTGTACACAATATTAATGATTTGCCTTTGAAATTAGC
TGCAGTAAGCAGGTGTTACAGAGCTGAAACTTCTAACTTGGCTGAAGAAAGGGGGATTTA
CAGAGTTCATCAATTCAATAAAGTTGAAATGTTTGTAGTTACTACTTCTGAACAATCTGA
AGAAATGCTTGAAGTGATACGGAACACACAAGAAAAAATATTTACACCACTGGGAATATC
TGTAAGGGTTTTAGATATGCCTCCTTATGAATTGGGTGCAGCGGCTTACAGAAAATATGA
CATGGAGGCATGGATGCCTGGTCGTCAAGCTTATGGTGAAATATCTAGCTGCAGTAACTG
TACTGATTATCAATCCAGAAGATTGAATATTACATACAAAACATTAAATGATGAATATTG
CTTTGTCCATACACTTAATGGTACTGCATGTGCCATTCCAAGAATGCTTATAGCCTTGAT
TGAGACACATCAGCATCCCAAAGGAAAAATAATAATACCTGAAACAATTCAGAAATTTAT
GAATGGAAAAAAGTTCATAATGAAGAACACTAAAGTGCCTGAGCTAAAATTGTTAAAAAT
AAAGAGAA
(1508 bp)

- SilkBase 1999-2023 -