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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12145_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_alkylated_DNA_repair_protein_alkB_homolog_8_[Plutella_xylostella]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002098 P tRNA wobble uridine modification
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:7.66 TPM:7.71
ORF EntryO_BomoSK10324_5prime_partial:A_BomoSK_comp12145_c0_seq1
Sequence
(Nucleotide)
AACGACGGTTATAAACAACACACATGGATAAACCACGATATTTCCACTTACAAATTAAAA
TGGATACATTTTTATTATAATATTTAGTTGATAAACAGATAAATTGTTTATAGACAATAC
ACTTCTTTGGTGTATACAAAAGTTTAAGACAATTAAAAAATTCAAACATTCAAGCACATG
GACTTTGAACATGTAGAATGTGTAGCAGCATTACCTTAATTTGTCATTTACTTTACTTTG
ACCGCTAACTACATACTTGTAAAATTCACGTTACAATTGAATGCTAACTTCACTCCGGAT
GTCACAATATAATTACATTCTCGAAGTTTACGACAATATACATTCATATAAATAACTATA
ATTTTTGGCAGAATTTCTCATCCAGTGAATAATTATAGGACAAAAAAAACTTTAAACAAC
TCATTTAAAAACGTATTGTATGTAGAGAACTCGACTGAGATCGAAAATAAATAAAAAAAC
TACACACCAATTTGTTTAAATCATTTTTGTGTTGGAAAAAGTAAATCTGATCTGATATTT
GACCATCACACATTGGCTTCCTCGCACACATTTCATACTTGCATTGTTGCAACACAAACA
ACTGTCATCTGTGACATCATCAATTTCAATATTTTACACTTCATTTCGAAATGAGCCAGG
GAATCAGTGGCATACAGCCAGCATGCAGCGTGCCACTTTTCACTCGAGAGGCACTTGCGG
CCAACGATGCCAACACACATGACGTCTTGCCTTTAGACAAAAATGCTGAGACGATATCCA
TATTTAACTTTCAACTTTCCCTATTACACTTTCATACAGACGACACACCAATTGCCTTCC
TCGTAGAAGCTCCTGACGATCGCGAGCCGCGCGTCTCGGCAGAGCTGATCCAGTTCCCCT
TCATCGAAGACGTGGTAGTATCTGAGAAAGGTGGTGTCGGGCTGTTGGAGCGGGGGCGCC
TTGCTGCGCAGGTTCCAGGGCACCAGCAGATCCTTGTGCTGGAACTGCGTGCGGTTCTCG
TGCACGGGCAAGTGGATGCCGCCCACCGTCAGTTTGTGCCGGTCCAGCAGCGGCGCCCGG
GTCCGGGACAGGTAGCTCGACTTGGTTTGATCCTTGGCCCACACCGTGATGAGCGCTTGC
CCGTTGGTCCGCAGGAGTCGGTGTATTGTTTGTAGCGAGTGGAGGCGCCGTGCCTGTGTG
CTGAAGTGGTGCACGACGGCTACGCAAATGATGAAATCAGCGCACTCGTCCTTGAGGCCG
GTGTTGAGCAAGTCCAACCGGATGCAGTCGGCGCCGGATATCCGGGCCGTGAGCCCCTTG
CATTCCTCTAGTAGACCGCTGCTCCTTTCACCGGCTACCTGCAATATATCTGTTCTGTTG
AGTATATTCTTGCCATTGCCACAGCCAAGGTCCAGCACTATAGATCCAGCCGGCACGTGC
TGCATGAAGTCTACAACTTTGGGCCAAGGCTTGTGCCGCGTTGTGCTGAAGTGTCCTGCG
ATTTGTTCGTATACCTGGTGCACATGTATGTCCTCTATGTTAGATGCAACATCATTGCTA
ATTGTCTCAGGAATATTACGTTCAATGCTATCACACAACATCTTGTATTCACATTTACAT
GGCCCGCATCTGGTCCATCGGAATGTCAAGGAGATTCTCATCTCCCTCTGTACAGTATCA
GATGTGATCACTTTAACTTTCTCATTATCTATTAAACGAACATCAAGGACTGGGTCCCAC
ATTCTTGGCTGTATTCCATGCTGCCAGTCATATCTAGCTTCATCTTGCATTATCATCATT
GATCTAGCCTCAACCATAACTGGCACATATTTCCCTGTGTGATGCTTCCAATCCATAACC
ACATTGGAGCCCAGTGATAGGGCCAGAATTGTTTCTCCAAATGGACTGTGTTTGTCGACA
TGCGACGGGATACCTTGCCCAGGTAAGTACTTGTTAACAGTCAGCTGAACTGGTACTCCG
AGATCGTAACCATAGTGTTGGAGCCTTCTCCACAGCAATTTACAAATCTTTGGTATTTTT
TCCTGCAATGGGCAACTCAAGTCAACGTCATTGCTGCCATATCTGAACTCATAACCATAA
TGTTTGACTTGACGGTTCTTTAATGTTGTTTCTACGTGTTGTATGTTAAAGGTATTAAGG
AATAACTTCTCTTCATCTTCGGTAAGAAAATCGGGTATTATATGTAAGCCTTTAGGATTT
GGATGCTTACAAATAATATCAGTATCCGGAACATTTTCAACAAATGTCACATAGAGTGTT
GTTCCATTCTCATCTACCTGTGCTTTCCCATTGCATGCCTCATAAAATAGTGATGCATTC
TCGGCTTTATCAAACATGAGATATGAGTAGGATTCTCCTTTCTCGGCAACAAACTTAGGC
AATGGTGTGTTTACCTTGTACTCTGTGAGCAGTTTCAACAGTTTTTGCTTATCAAATCCT
GTAGCTTGCCCCACATTGCAAAGAATCACATTGGGCCTAGGATCTTCATAACAAACAATT
CCTTTCAGAGTATTCAATCGGGCAGCAAACCGTTTGCGTTTCTTCTCATGTTTTCTATCG
TCTTCCATGTTGTATCAACACTAATTACAAATATATTTAAAGCTTAGTCTAACTAAGGGA
GCACTGTCACAAGTAAAAAATACAGAATCTGATACAGAAACAAATGTTCACGTTTGCTTA
CTTGAATTTGATAATAAGTGTATAATCTATGATTGCAGCACTTGTTAATTGGCACTTACT
TGTATAGGATGGCGGCTAAAAAAAATGGTTTTGTTGATATCGGTGATGGTGATTCACTAA
AGACTACTAAAAAATCATACGAGCAAGACGAAAAATTAATTAATGGTAAAATAAAAGATC
GCAAAAATGGTTACATGAAGTCCACGCAGTCTAATGGATCAACGCCGAAGATGACACAAG
TGGAGGGAGGCGGCCTGCCAAAGATAGACTGGTCCAAGTACGACACGTTCCCGGGCTCGT
TCGAGAAGTGTTCCCTACTGACCGCCGTCCTCACGCACGTTGGACTTTACGTTCTCATGT
TCCTGGGCTTCGTCAACCAGCTCATATTCAAGCCTAAGGCCGCCACCGAGAAGAACAGAG
AGGGGTACGCTCCGCTGTACGATCCGTTCGAGCAGTTCTTCTCTCGGTACGTGTACCGGC
GCGTGCGGCACTGCTTCAACCGACCGATATGCTCGGCGCCTGGAGCCGAAGTCGTCCTCA
AGGAGTGGGAAAGCACCGATCACAATTGGACTTTCAAGTTCACGGGCGTGGAGCGGCGCT
GCGTCAACCTGGGCTCGTACAACTACCTGGGGTTCGCGGGCGGGGAG
(3347 bp)

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