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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12143_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]
Ontology
GO:0002063 P chondrocyte development
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0009954 P proximal/distal pattern formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030279 P negative regulation of ossification
GO:0031667 P response to nutrient levels
GO:0032580 C Golgi cisterna membrane
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
GO:0051216 P cartilage development
GO:0051923 P sulfation
GO:0060349 P bone morphogenesis
Transcript
Level		FPKM:1.64 TPM:1.65
ORF EntryO_BomoSK10318_5prime_partial:A_BomoSK_comp12143_c0_seq1
Sequence
(Nucleotide)
CTACGACATAACAGATTATATTAAAAACGTAATAAAATTCCAAAAGTTTTTAACATAATT
TTCAAAGTGAATTAAATTAGCTCATTCAGTTATTTTCTCCAAACTCAGAGGTCTACTTGT
AAAACCGAATTTATAAAAAGTTCACAGGATTTGTCAAAATTCGTTTTGATGTCTATATTA
CAAAAAGAAGCCCTCATAAACAAAACTTACATTCGTGAATTCCAGAAATAACCAAAACAT
ATTACAAATTTGCATTTCATGAAGAAAAAAAAAACAGCTGTCATAGAATAAGGCACATGA
ATAACAATTAATTGACGCTGTGACTTAGTAAATATTTATAGAGAAATAAATTCCTAGCGA
GTCATTATGAATTAGGATATTTTACAGTAACTCTAACAGCACTATACTTAAAGATACATA
GTTATATAAAGGTCCAGAATTCCTGACGAAATAATAGTTGTAACTTTGATGTATTTAGAA
ATCCAATTATCAAAAAGTCAACGTGAAAGTTTATGGCCTCTGCTACGGCTATTATTTCAA
CTGAAAAACGATTTTGATTACATAATTGCTTGTTTTGTTTTGAGTTTTGAATGGCATACC
TGTCTAACTAGCTTACGTATGATGTGGTATCCGATTTGCTAGTAAACTAGGATCCCATTT
ATATAGCACACAAAGAGTCCCCTCAAAACTATTATAAATACCTAAGTTTGACTGCACCTA
ACCTAAGCGACCCTGTACTACCTGGCACCTTTCTCGTTCTTTTCCTTAGGTTTCTCTTCC
ACCACTTCCGCTTCCGCTTCCGGTTTATCTTGTGGCGGCCACAGGACATCAGGGTGGTTT
AGCATATAATACGCCATGTGCTTTTCACTGCCGTAAGTCGATGCCTTCGTTCCCAGACAC
ATCTTGAACTGGCTCTTCTCTAAATTTTTATCACAGTCAACCGAATGGAATATATGGACT
AGAGTCTCGTCAGCTATCCTGTATCCCGTTAAATTTGATTTAATTAGCGTTTCAAACAGC
TGCACGTCTTCTAGACCCCAACCCTTAATGTTCAAATCGAATCCCCCTATCCGTTCGAAG
TCACGTTTATAAATAGCTAAAATACCAAAACCGTACTGCCTGAAATAGCCCGTATCATCA
GTTATTTCCCGGCTGTACTTCAAATTCGCCAATTCTCTGTCCGTTCTCACTGTTTCTTCG
TCATCAATAAACTTCTCCAATTCAGTGTCCACAAACAGAGTTTCGCCTTTAACTTTATTA
TAATCATCACCGTTCACTACATCTGGATTGTACTCACTAAACACTATTGGGAAATAAACT
TGGTTATATTTTATTGTGTTGATTCTTATTCGACGAAGGCTCTCGTGGTTGAACATCATG
TCCACGTCAATGAAGAAGACAAGGTCGTCGCTATCGCAG
(1419 bp)

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