SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12121_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
Ontology
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
Transcript
Level		FPKM:6.63 TPM:6.67
ORF EntryO_BomoSK10276_complete:A_BomoSK_comp12121_c0_seq1
Sequence
(Nucleotide)
TAAAATAATAATAAAAAAAAAACAAGAGTTTATCAAATATAAGTTGTACAAAGACGTCGT
AATCGTCGCGGGCGCATCGAGGGCGCGGGGCGGGAGTCGCCGGACACTGTACAAGGCGGC
TCTCGTCCGGCTCTCGAGCGCTAATAAATAAACCGATCGAAGTAACGCGGCGGTCGGTCG
GCGGAGCGGTCAGTCTAGGGGCGCGGGAGGGGCAGAGGGAAGGGGACGCTAGGTAGGGGG
AGGGGGAGGGGCACCGCCGCCCGCCGCACTCTCTTCTTCGTCCTCCTCTTCTGGGTCGAA
CTTCAGCATTAGCTGCTTCAATTCGAGGTAATCGTTGATGAGTCTACGGCGGCCGCGTCT
GTCGAGTTCGTCTTCACACTCGTCTTCCTGCAGCTGCAAGATCGTGGCCTTGGGCTCGAA
TATTGGCGCGTGCCGTCGAGACACCGCCTTCTCGTATACTTTCACACTCTCCGATGGAGA
ATATTGATTGATTTTAGCATCTGTGAATCCATAGAGTTGCTTGAGGTGCTGTTTGAGTAC
GAGCAGCAGGAGACAGCCGCGCGCCTGGCGCATGGCGTCCCGCAGCGCGCGCGTGTTGTC
CGGTACCCGCGCCTCCAACGCCTCTGCGTCTTCTTCTTCCTCCTCCTCCTCTTCCTCCGC
GGTACCTTTCTCTCCTGCATTGGATTTTATTAAGCCCTCACGAAAAAGCTGTAATAAATT
TGACCCTGACGTTGAAATTATGATATCTATATGATGTATTATGAACAATGGTTCATCTTG
TACTTGATATGGAAAGTAACTTAAATTATCGGCCAGGTACAGCATCTGATCTAATGGAGC
AGTCGACACATCGTCAAACTGTTTTAGTAATGACAAAATTAAAGCTCGTCTCTGCGGCCT
TGTGTTCCTCAATAGTGAATATAAAAACCCGTTAAGGGCAGTGGGTAGATCATCTAGTTC
TTTTTTCCTAAATCCCCTTATGACGTTTTTTTCTCTGCTGTTCGACTGCAAAGTTTTTTG
TAACTGGTATGATAGTTTGATTCCTAGTTGCGCTTTCATGTGGATGAAACCGGGATATTT
TTTATCTATTTCCTGAAGATTTTTGTCCGCTGTGTGTGACACTGTTACCTCTAAGTCCGT
GCTCATGCTTATTAAGTATGGTACAATCTGTACAGGATGCACGAGCCCCTGCGCCAAGAC
GAGCTGTACAACCTTCATGGCGGCGGACCGCACGACCGTACTGTGATGTATGGACGAGCC
GAGGATTTCTTTTAGGTACAACTGGATCACCGTCGACGCCATGCCCGATGATACGTCACC
CATCTCTTTGAGATTCTCATGTTTTGATCTTGTTGACCACTCTTTATCTTGCCTTATCAT
TCTTTGCTCTTCCTCTTGTAAGTACATTTCAATGTTCCTCAATACGTCCACTTTCATTTC
TATCGGAGCTAAATCTGAGGTCAGTAGTTGATGGTAGAATTCTTTGAGTTCAGGGCGTAA
CATGAATTCGTAATGCCGTACGCACACTGAACCCAGGGCTTTAAGAGTATGTGAGACGAA
GTCCTCATCTTCCAAACCCACAAAAAACATCAGCGTTGAATAAACCTGTTCTTTTATGTC
GTTTGGAAGACCATCAATGACTTTGACGTCCGTAAAGTCAAAGTATCTGAGTAATAAGCC
CACGATGAAAAGTGCACGACGAAAATGAGGTCTCGAATGTGATGAACGTGTCATTTCGGG
ATTTCGCTGCCAGCTGCTTTTCCATTGGAGTAGGACCCCGTGATATTTATTAAATACATC
CCTAATTAGTTTATAATTATGCGTGAGATTGTTGACTATAGCTGCTAAGCAGGCTATGCA
CGAAGCGATGACGTGTTGACCACGCTGCAGAATAAGTTTAACGGCATCTTCTTCCAACTG
AGCCAGGAATACTTCACTCGGGTGTTCCATTAGCGGTACGACTAGTTCAAGAGTGGACGC
CACTGTCGACATTATTTGCTGCTCGTGTTGATTCTGACATTTCAAACTGAGATACGGTTG
CAAAGTTAAGGCATGGTTAACAAGCAGCTGCGGTCTGATTTTTGCAAATAAATGCAAAGT
TGAGAGACACGCTAAAATTCTTTGTGGTGAACTGGAACCTTCTGAACTAGTCTCTTCCAA
CTGTAGTAAGCTCTCTACAAGACAGTCGACTATTTGTTGACAAGCTACTAGCAGCGATTT
AGGCGGTTGATAAATTATTTTAGTGGAATCATCTTTATCTTCTTTAGGTTTGAATAAGCT
CATAAGTAATTGCTGAAACCATTCGAGACCGATGTCTCTGGACGAAATAACAACGTCCGT
GATGTTCAGTACTTTCCTGGTGAGAGGGTCGGCGGCCGCCGCCGTCATGTCGAGGGCTCC
CGGCCGGCTGGTGTTTAGGCATGGACTGAACCACATGTTCTGAAATACTTCCATAACCAG
TTTCCTGATACCTTCCTCGTCATTTACTCGTCTGATCATTTTTACACATATCTCGGGTAT
TTTAGGAAACTCGGGGCATTCTATACAGATGTCTTTTAAAATTTTAATTACACGTTTCCT
TACTGATACGCCAGTATCCAATATTCTGTTTGAGAGCATAGAGTAATACTTGTCGATAAG
ATCGTGTCTGCTCAAGACGAATTTTCCAACGAGATCGACGGCAGCTTCCCGCACTGCCGT
GGATTGGTCGAGGAACGATCGGTTCACTCCGATCTGCATATCGGGCCTCGCCAATACGGA
CGGATCTGCTTCGACTATCATCGCCAAGCATTTCATCGCCTTCGTTCGTATGGCGATCGT
ATTTTCGCACAGTATAACAAGAATTTTTCGCAAATACCGATCAAAACTTTGCGAGAAAGA
CCTTTTTGAAGCTAGATATTGCGAAATAAGTTCAGCTCCACTATAATCTATGTACGATTG
CATCACCTGCACTTGGGTGCCACCCTGGTACCGGAATGGCCTAATTTTTTCTATAAAGAA
ATTCTTTCTTCGTTCTATTGTTTTGAATTTTTCTGCCGAATCGATAGCACTCGCGATATG
CTTTCGATCCGATTTAGAGTCCTTCAGGCCTCCATCACTGTCTTCGTCAGCGTCGGATTC
CTCCTCGCTAGAAAGTTCTCTATGACGCTTCTTAGATTTATTTTTAGGCTTTTTTGTCGG
CGATGTATTCTTCGGCTGAACCACCATATCCCTGTACCACTGCGTGATATAAAAATGTCG
AGCGCAATTCCAAGCTTGATCCTTCTGCCCGTTTATCGCGAGATAATCCAGCAGGACCCG
CTGCAGGAATTCCGTTCTCTCTTCGTCCTCGTCGAGGCCGGACGTCACGTTCTGTCCGTG
GGTGCCGTCCTTCTCTTCCTCGGCGCGGATGTCCCTCACGACAGCGTCCATGGCGGCGAG
CTTGCCGCGCGAGTGCACGCTGTCCCTGCGCAGACGCGCCGCTACCAGCCCGAGGTACTC
CAGCGACGCCACGCGAACGGACATCTCCATAGATTTGTCCGACATGTACTTCACCAACAT
GGTTCCGAGTAAGCTGAGCAGTAGTTCCGTCGCGGGCCACTCGGGTTTGTTAACAGTCGT
CAAGAGGTCGTGTACGAAATTTTCAAACAGCGGCCTGAAGTCCACCTCTTCGGAACGACT
CCGACATTTGTTTAGGAATGACGTTAGGAATGTGCCACCTACGCTTATTGCCGCTTCGTA
CTTTGAGATGATGAGCAGGTCTTTATCTACAGGTTTTTTACTATCAGAAGACTCTGAATG
TTCCTTGTCTTTCTCATTAGATTTACAAAGCGTCTCTGGCAGAGTGACGACACATTGTAC
AAGTTGTAAGACAAGCGCCGTGAGCATTTGAATATGTTGATCAGCATTTAGTTGAAAGGA
ACGCAAATTGTGTTTTGAACTGGGTATACGGGCTATCGATGCCAATATATCTTCCAGTAA
GAGACGTCGATGTTGTTCATATTTTGTAAATATCGTCGTGACGAGTTTCAACGCCGACAG
CTGCAGCTCGCTGACGTTCTCTACGAAGAAGGGCGAGACGCCAACAGTGGAGGCGTGCAG
CACCGTGGTGTCGGTGAGGTGGTGCGCCGCGAACAGTTCCGCGAGCAGCGTGACGCTCTC
G
(4141 bp)

- SilkBase 1999-2023 -