SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12095_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_putative_tRNA_pseudouridine_synthase_Pus10_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:0.31 TPM:0.31
ORF EntryO_BomoSK10222_complete:A_BomoSK_comp12095_c0_seq2
Sequence
(Nucleotide)
AGAAGAGAATGGAAGAGAAAAATTCGCTGTATCGACCCCACCTAGTAGGATAAGGTGGAG
ATAAAGAAGAATTTAAATGCTTAATTTCAAATAAATACACGTATAAATATTCAACACCGT
ACGGGTAAAAAGCAAATAAATCATCACAAGATCATCAATCGAACCCCCAACACTCGGCCC
CATAGTCAGCAGCGATGACTACCGCGTCACTGAGTCATTCATTGGAATGAACTTGTTTCC
GGTGTTTCCGTGGCATTGTTGGCGTCCGTGAGCTTCAGTGTCCAAATCGAATCATTTATT
GGGGTCGCGGCCAGTCGAGCAGCACCGCGGTGACGTCGAGCGCCAGTATGTCGGCCCGGA
AGCCCGCGGCGTCGCGGAGGCTCGGCGTGGTGCGACCGAACTCCCCGTGGCACCACTCCT
TCACGTACGTGCCCGCTTCCGTGCGGATTGTGAGGGTGAACAATTGCGGGTAGTCAGGCA
CCCTCCTGGCCACTACGTCATATATCCTCCGGGTCCTGGTGAGCAGCGGGCGCCTGTGCA
GCACTCGGATCGGGGTTCTCTGTTTCACCACGATCCTGGCCTCGTCCCCTGCCTCGGTGT
TCCTGTACTCGTTTATCCTCTGGATGTCCTCCTCGGTGACGGCGACAGGCGTTTTTCCAT
TCAGAATATTCGGTTCAGCGTTCTCATTTCCGAGCTTTATGCACAGAGCTTCGTAAGTCT
TGCATTTCGTCTCTTCCCCCTTTTTAAGTTCCGACAACTCGTTCCTGGAGACATGCATTA
GTTTCTGAACGATCACTTGGCCACCTTTCGAAATCTCCTTGCAGACCCTCTTCAGCTCGT
CACCGGTGAGGTCTCTTCTCGGGTCTGTGATTTCGATAGCGAAGGGTCTACCATCACCGA
GACACCTCACGTCCACGTCTTCGCGTCCAGCCGACATGAACTTCAATCTGTGGTCCACGT
CTTCAGGTGTCAAGTCAAATACTTTTGCTATGGGTTCGAATAAGATCTCCTGGACGGATG
ATTCCATCATCCTCTTGCCCTTGATCAGCCAGGGCGTCTGCGGAAGCTCTCTGCTCAATT
TTATATACCTACCCCCCAGATAAGAAGGGGCATGCACGCACATAGCACTGACACACTTAG
CTTCAATGTCCACCGATGGAATTTTATTCCACTTATCGACACCCTTCAACTGCTCAAGAC
TAATCTTGTCCATGGCCTGTTCTACTGATGGCCGGGTAAACTCAACCGTGAACCTCCTTC
TCTGCTTCTGTCTCTCTTGGAACAATGATGGTGATAATTTCTTTAAGATTTCTAGTTCCT
GTGGTTCATCAGGATACTCCATATTAAGTGTAATCAGTAACGGTGAAATGGCTCCGGAAT
CTAGTGTCATACCTATTTGTTCGGCAAGTTTGACACCAAACGTCCATTTCCATGCTTCCT
TCAGTGGTGTTAAGGTATCTTCTTTATAATCTTTAAAGGCATCACTCAGGTGTAGGATTA
TGGCTTTATCTCGTAATAATGTAGCGATCGGAGCAGAGAGTGCACATGCAAAAGTTGAGC
ATTCGTAACTGAAAAAAACGTATATATCTTTTAGAGTAATGTTATATTATATTTATAAGT
ACATACGGTACATCGAAGTATTGAAGTGT
(1649 bp)

- SilkBase 1999-2023 -