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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12095_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_putative_tRNA_pseudouridine_synthase_Pus10_[Papilio_polytes]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0008033 P tRNA processing
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:7.19 TPM:7.23
ORF EntryO_BomoSK10220_complete:A_BomoSK_comp12095_c0_seq1
Sequence
(Nucleotide)
AGAAGAGAATGGAAGAGAAAAATTCGCTGTATCGACCCCACCTAGTAGGATAAGGTGGAG
ATAAAGAAGAATTTAAATGCTTAATTTCAAATAAATACACGTATAAATATTCAACACCGT
ACGGGTAAAAAGCAAATAAATCATCACAAGATCATCAATCGAACCCCCAACACTCGGCCC
CATAGTCAGCAGCGATGACTACCGCGTCACTGAGTCATTCATTGGAATGAACTTGTTTCC
GGTGTTTCCGTGGCATTGTTGGCGTCCGTGAGCTTCAGTGTCCAAATCGAATCATTTATT
GGGGTCGCGGCCAGTCGAGCAGCACCGCGGTGACGTCGAGCGCCAGTATGTCGGCCCGGA
AGCCCGCGGCGTCGCGGAGGCTCGGCGTGGTGCGACCGAACTCCCCGTGGCACCACTCCT
TCACGTACGTGCCCGCTTCCGTGCGGATTGTGAGGGTGAACAATTGCGGGTAGTCAGGCA
CCCTCCTGGCCACTACGTCATATATCCTCCGGGTCCTGGTGAGCAGCGGGCGCCTGTGCA
GCACTCGGATCGGGGTTCTCTGTTTCACCACGATCCTGGCCTCGTCCCCTGCCTCGGTGT
TCCTGTACTCGTTTATCCTCTGGATGTCCTCCTCGGTGACGGCGACAGGCGTTTTTCCAT
TCAGAATATTCGGTTCAGCGTTCTCATTTCCGAGCTTTATGCACAGAGCTTCGTAAGTCT
TGCATTTCGTCTCTTCCCCCTTTTTAAGTTCCGACAACTCGTTCCTGGAGACATGCATTA
GTTTCTGAACGATCACTTGGCCACCTTTCGAAATCTCCTTGCAGACCCTCTTCAGCTCGT
CACCGGTGAGGTCTCTTCTCGGGTCTGTGATTTCGATAGCGAAGGGTCTACCATCACCGA
GACACCTCACGTCCACGTCTTCGCGTCCAGCCGACATGAACTTCAATCTGTGGTCCACGT
CTTCAGGTGTCAAGTCAAATACTTTTGCTATGGGTTCGAATAAGATCTCCTGGACGGATG
ATTCCATCATCCTCTTGCCCTTGATCAGCCAGGGCGTCTGCGGAAGCTCTCTGCTCAATT
TTATATACCTACCCCCCAGATAAGAAGGGGCATGCACGCACATAGCACTGACACACTTAG
CTTCAATGTCCACCGATGGAATTTTATTCCACTTATCGACACCCTTCAACTGCTCAAGAC
TAATCTTGTCCATGGCCTGTTCTACTGATGGCCGGGTAAACTCAACCGTGAACCTCCTTC
TCTGCTTCTGTCTCTCTTGGAACAATGATGGTGATAATTTCTTTAAGATTTCTAGTTCCT
GTGGTTCATCAGGATACTCCATATTAAGTGTAATCAGTAACGGTGAAATGGCTCCGGAAT
CTAGTGTCATACCTATTTGTTCGGCAAGTTTGACACCAAACGTCCATTTCCATGCTTCCT
TCAGTGGTGTTAAGGTATCTTCTTTATAATCTTTAAAGGCATCACTCAGGTGTAGGATTA
TGGCTTTATCTCGTAATAATGTAGCGATCGGAGCAGAGAGTGCACATGCAAAAGTTGAGC
ATTCGTAACGTTTTTTCTCCAAAGTCTCTTTGACCATATTAAAGCATTCAGACCAGTTCT
CTTCCTGGAGTATACCTAAACAGCTTACGCATATCGATATCTTCTTTTTCTTTTTCGGTG
GTTCATCATCACAGCCATTGACATCTTTATTGCCATTTATATTGTCTACTGGATTGCTAG
TGATTTGTTGTTCTTCTGAATTATTTTCTACTTCTACACCGCTTTCTGTATATTTATGTA
TGTATTCTTTGTAGTTTTCGTAAGTTGCCGGGTTCTTAAGCCCTAAATAACGCAGGCAGC
ATATATCGCAACACCCTACCTCTTTACAGAATTTAACGATGGCTTTATTGTCCATCTTCC
TTTTATTTTACACTGCTAAAAAGCATGTAACGAAGTATAGTAAACAAATGAATATCACTT
TCCAATTTTTTTTGTAGTTCAGTTTTAAGTATAAAAATTCTGCAGTTACGAAAGAAGAGA
ACAACTCAACAGTGTCAGGAGTTGCATGAGTTTGAATTCTGTATATATTCAAATTTTATT
AGTTTATTTTAGTTTTGTTTAAAATAAATTTTGCCCTAAT
(2140 bp)

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