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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12058_c0_seq3
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:2.23 TPM:2.24
ORF EntryO_BomoSK10132_complete:A_BomoSK_comp12058_c0_seq3
Sequence
(Nucleotide)
GCCGGACTTATCGTCACAGCTCGTGATTGTTGTTATATTTTAAGTTTAAAACTAAATATG
TGGTTGTTAAGGAGATGTGGTTCACGGAATTCTCTGACTTATTAGGTATGTTTGTGGTGT
AGTGACCGGTAAAACGTTATAAAACAATCAAGCAACCTGTTTTTTTTGAAAAGGAGATCA
GGTACTTTCTCTTTCAAAATATCAACTGGACGTGCTTCACAAAAACTCCGGGGAAGGCTA
TTCCAAAGACGAGTTGCTGAGACAGTAAAGGAATTTAAGTATAATCAGGGAATACCTTGG
ATCTCGTCGAGAAAATAATACAGTTGCAAGCCCATAATACACAGCTGAAAAACATCATAA
ATAAAACTACACCTTGCGATGGCCAAAAGCAGAAAAAAGTAGACCAAAGAGAATTTATGT
TTGAAAAATGCCATTATCGTCATGTCCTCCTAAGGGTATCGTACCTTGGCTGGGAATATC
AAGGTCTGGCTGTACAGGAGAATACAACACAAACAGTAGAATATCATCTTTTTGAAGCCT
TGAAAAGGGCCTGTTTGATACAAAGCCGTGAAACCTCTAATTATCACCGATGTGGTCGTA
CAGACAAGGGAGTTAGCTCATTTGGGCAGGTCATATCGATATGCCTAAGGAGTAAACATT
CACCGGAGGAACAAAACAAACCGAGCTGCATTAGAAATGAGATTCCGTATAGTAAATTGT
TGAATCGTCTGTTGCCCAAACATATAAAGGTTATTGCTTGGATGCCAATACCGCAGGACA
GACCGGATTTCAGTGCACGATTCGATTGTAAAAAACGTTCCTACAAATATTATTTCCCAC
ACTCCGGGCTGAACCTGCCCGCCATGCTGGAAGCGTGCCGTCACATGATCGGGTCGCACG
ATTTCCGCCATCTCTGTAAAATGGACGTCGGTAATGGTGTATTGGAATTTATAAGAAGAA
TAATGAATGTTGACATCGTACCTGTCGATGTTAATGATGTTGACAAACCAACATCAATGT
ACTATCTGCTGATAGAAGGAAACGCATTTCTGTGGCATCAGATACGTTGCATTATGGGTG
TCTTACTGCTGATAGGAGAAGAAAAAGAAAGACCTGACGTGGTGTTAGAATTGTTGGACG
TTGAGAAGAATCGGGGAAAACCGCAATACAGCATGGCGTCTGACCTCCCGTTGAATTTGT
TCAAATGTGCGTACGAGATAGAAGATACCAATCGATGGGTGTACGAAAGAGAAGCACTGA
TCACTCTCATATCTGATCTGAGAACGGAATGGACTATGCACGCCGTCAAGACAACGATGA
TTCAAGATTACATACGCGAGCTAGAAAAGGTCCCTCTGGCGAGCGAGACGGAAGACAGGG
CCAATGACGAGTGCGAGCAAGATGAAATCGCATCGTACGCGGCGTGCTTGCTGCAAGGGG
TGAAACCGAAAAATTACACTCCATTGATGAAAAGACCCACATGTTCAACGCTACACGAGA
AGATTGCGCATTACAAGAAGAGACGGAAGATAATAACAAGCTAATAATTTCAAGGGTCAT
TAACTCTAGAAGAGGCG
(1577 bp)

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