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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12058_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:10.99 TPM:11.06
ORF EntryO_BomoSK10131_complete:A_BomoSK_comp12058_c0_seq2
Sequence
(Nucleotide)
CCTACCTACATTTCAACGATCTGTTCACTGTTCTTCTCTTCTTCATAATTAAAATACATA
TGTGAATTTAAGTGTACATATTAACTATGCCTGGGATATAGGGTTGTATTAAAATATACG
ACATGTGCCTGAAACAATAATATTAAACTCGTTAAGATATGGAAAAACTGCCACCAAAAC
AGAAGATTAACCGGAACGCAACAAGAGAGGAACTTTTAAAGTTGGACAAAAATGATCTCG
TCGAGAAAATAATACAGTTGCAAGCCCATAATACACAGCTGAAAAACATCATAAATAAAA
CTACACCTTGCGATGGCCAAAAGCAGAAAAAAGTAGACCAAAGAGAATTTATGTTTGAAA
AATGCCATTATCGTCATGTCCTCCTAAGGGTATCGTACCTTGGCTGGGAATATCAAGGTC
TGGCTGTACAGGAGAATACAACACAAACAGTAGAATATCATCTTTTTGAAGCCTTGAAAA
GGGCCTGTTTGATACAAAGCCGTGAAACCTCTAATTATCACCGATGTGGTCGTACAGACA
AGGGAGTTAGCTCATTTGGGCAGGTCATATCGATATGCCTAAGGAGTAAACATTCACCGG
AGGAACAAAACAAACCGAGCTGCATTAGAAATGAGATTCCGTATAGTAAATTGTTGAATC
GTCTGTTGCCCAAACATATAAAGGTTATTGCTTGGATGCCAATACCGCAGGACAGACCGG
ATTTCAGTGCACGATTCGATTGTAAAAAACGTTCCTACAAATATTATTTCCCACACTCCG
GGCTGAACCTGCCCGCCATGCTGGAAGCGTGCCGTCACATGATCGGGTCGCACGATTTCC
GCCATCTCTGTAAAATGGACGTCGGTAATGGTGTATTGGAATTTATAAGAAGAATAATGA
ATGTTGACATCGTACCTGTCGATGTTAATGATGTTGACAAACCAACATCAATGTACTATC
TGCTGATAGAAGGAAACGCATTTCTGTGGCATCAGATACGTTGCATTATGGGTGTCTTAC
TGCTGATAGGAGAAGAAAAAGAAAGACCTGACGTGGTGTTAGAATTGTTGGACGTTGAGA
AGAATCGGGGAAAACCGCAATACAGCATGGCGTCTGACCTCCCGTTGAATTTGTTCAAAT
GTGCGTACGAGATAGAAGATACCAATCGATGGGTGTACGAAAGAGAAGCACTGATCACTC
TCATATCTGATCTGAGAACGGAATGGACTATGCACGCCGTCAAGACAACGATGATTCAAG
ATTACATACGCGAGCTAGAAAAGGTCCCTCTGGCGAGCGAGACGGAAGACAGGGCCAATG
ACGAGTGCGAGCAAGATGAAATCGCATCGTACGCGGCGTGCTTGCTGCAAGGGGTGAAAC
CGAAAAATTACACTCCATTGATGAAAAGACCCACATGTTCAACGCTACACGAGAAGATTG
CGCATTACAAGAAGAGACGGAAGATAATAACAAGCTAATAATTTCAAGGGTCATTAACTC
TAGAAGAGGCG
(1511 bp)

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