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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12056_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]
Ontology
GO:0006366 P transcription by RNA polymerase II
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0046872 F metal ion binding
GO:0070063 F RNA polymerase binding
Transcript
Level		FPKM:7.89 TPM:7.94
ORF EntryO_BomoSK10129_complete:A_BomoSK_comp12056_c0_seq1
Sequence
(Nucleotide)
GCTGAACGACCATCGATAGCGGCTTGCTGTCAAAATAAAATAAGTTTTATGAACGTGAAT
GCCTTGTAATCTTTTGAATATTAGCATTATGCAAGGCTTAGACCATTATATCGAATGAGT
TTTGATAAGTCAAACAAACGGAGCTAGGGATTAATAGCGCAAAGGTCGTTTACACCTTTG
CGAGTGGCTTCGTGTCGCGTTCGCTGAACTCAAAGAAGGCGTCCGGCTAGACAGGATGAG
TGACGACAGCGAGGACTCGCCTCCGCGACCTAAACGTAAAATTAAAAGAGTGACGATTCT
GTCATCCTCCGAGTCCGAGAGCGACGACAGCGTCACTGCAGTCGGGACACGTCGAAACCG
AATGAGGGTAGTGAGCGACGATGAGATTGACAGCAGCGGTAGCGAGGTGGTGCGCACTCG
TCGAGGACGGGCTCTGCCCAAATTACGGGATTCGGACAGCGAGGGTGCTGCATGTCTCGC
CGACGCTGTACCGAGGCCGACCTCAGGGTTCGCTTCCGACAGCTCAGAAGGCAACTCCGA
AAAATGTTCCATTTGCCTTATGCGGTTTACTGATCAAGAAGTAGGAACCCCTCAAAGTTG
TGAACATATATTTTGTCTGGATTGTATTACTGAGTGGTCAAAAAATGTGAATACCTGTCC
TGTGGATCGGCTGACATTTGACTCTATTGTAGTGAGAGCTTGTGCCGGTGGACGTGTACT
GCGCACTGAACAAGTGAAAGTTATTGAAAGGAGACCTTCTGTAGACGTACTGGTGGTTGA
AGACCCAACAGTGTGTGAGGTATGTGGAAGGTCAGGAGATGAAGAGTCAATGTTATTGTG
TGACGGGTGTGACCTCGGATACCACATGCAGTGCCTTTCCCCCCCTTTAACTGAGGTCCC
TATAGATCAGTGGTACTGTCCCAGCTGTAATGACTTGATTGATGTAGTACACACTTCTGA
GGTGGACGACCTCCTGTCAGATGTGTTCGTAGATATGTATATGCCGATTGGACCTCGTCC
TTCACCACTTAGACAGCCTCGTAATGTGAGGAGATCATCTAGACAGAGATCAACAATAGA
AGGTCCATCAATATCTTCAGATACACAAGGCAATGTGTTAAACTCAAATGTCATTCCCTC
CACATCACGAGGTTCACTATCTATTCAAAGCAGTAGTTCTCGAGGGTCAAGGACACGCAG
AGTGACAACTTCTCGTCCAACAAGGCGTCGAAAATATAGAAGACAAAAAACAGTCATAAT
AGAATATGAAGAAGCTGAAAATGGAAAAGTAGCAATCAAAACAGTACAAAAGAAAGTCGC
AAGAAAAAAGATAAGGAAGCGAAAAACTCGCACGGCGGCCCGGCGCGCCCTGGTTCGGGA
GAGTGTGCGCGTCCGGCTCGCCGCCCTCCGTCCCCCCAGCCTACCCCTCGCCCCAACCCG
CCTCGCCCGCACCCTGCCCCGCCCCGCCCTGCGGCTGTTCGGGGACCCGCTGGAGCTAGA
CTACTTTTCGGACGAGGCGCCTGGCGACTCGGAGTCTGCCAGCACGGCCGTGGCTGCGAG
ATCCACTTCCGCTCTGTTGAGCGCTCACAGGCAGGCAAGACGAAAGGCCGTTGGCATTCC
ATCCCCGCCTGTGGCTGCTTCCGCGCCGGATCTCTTGTCGAGTATAATGGAGAGTCAAAC
ACTGCTGCACGCCAAGAACTCAATAATGTCAGTCACCGGCGACGGCAAGCTCGAGATAAA
ACTACGATCACCGATCGCCAGGCCTCGGGAGCAGCGCTCGGACCCGACGACGAATGGGAG
AGTCGACTTGACGAAGGGCGAGGATTCTGCCAAGAAAGCACCCTCCTATCCGGGTCAGCA
TCGCAGTGGCGGCTGGGGAGGAGGTTACCGCGGTAACTATCACCGGGAGCAGGGCCACAC
GGGGTTCGGGCGTGCAAGTTACGGGGGTGCGGGGTACGCGGGCGGCGGTCAACAGGCTCA
AAATCAGAATTCCAACTTTGACGACCGACAGGGAAGCGCGTACCGTCCGATGGACGCGTG
GCGCGACGAGCCCCCCCTCCACGGAGACTACGGCAGGTGGCCCCCGCGACATCCGCTCGC
ACACGACGTCCCCTCCGATCGAAACCGCCGCAACTCGGACCGCGGTCCCCCACCACGCGC
TCCGCCCCCCTGGCGACCCTACGTGCCGCCGCATCCCTCGCGCCACTCCTTCGGGGGCTT
TGACAACCCTCTAGACATGCGCACGGCACCGCACCACTACGACCGCCCCACCGTGGCGGC
GCGTCCTCTGCCAGAACCGCCCATCTTTAAATTCGACGATAACAACGAGGTCGAGCGGTC
GGAAGACGAACGCAGCGACCCCGACCTGGTGATCGACACGGACAAGTACGACCCGACCGA
GCCCACTAACGACGACAGCGCCGAGGAGCCCGAGCTCCCGCCAGAGGGACCGCACGTTGA
CGTCAAAAGTGCAAATTCTAACTTTCAGTCGATCGATGAATCCGTCGCCGAGTCCGAGAC
CGAGGCGGAGGCGGAGGGAGAGACGCACGGGGTGGGGGCGGGGGCCGCGGGGATGGAGGC
CGCCGCCGTGCCCG
(2594 bp)

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