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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12041_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:14.34 TPM:14.43
ORF EntryO_BomoSK10107_complete:A_BomoSK_comp12041_c0_seq1
Sequence
(Nucleotide)
CGGGATCTCCACCAGCAGCGGGCGGCGCTCGGCCCGCAGCAGCGCGTCGGTGCTCAGCAC
GGTGTACGACGTGGCGCGGTACAGCGCCGCCGTGGACGCCATCCCGCCGTACTCGGACGC
GGGTAAAACACTAGCAAATTCTTCGATTAACGTCTTCGTAAGCTCATTGTACTGCGGCAC
CTCGCCCTCAAAGTGCACCAGGAATTCAGGCGACAGCAAGTTCTCCGAGTGAGTCGAGAC
GTAGACCTCGGCTTCGTCAGCGGACTCCTCCTCCATGTCGGAGGACATGGCGCCCACGCT
CCTGGCCCGCGCCTGGCAGTGCATCTCCTCGCAGAACTCGGTGCACACGTGGACCGACTC
GGAGCACACTTGGTGTTTTAGTTTCAGGATGAGGTTGACGGCGTCGTTGTACATTTCCTC
GGTGAGAGGGGGCGGGGTGCCTCCGGGGAGGGCGGGACTGGGCAGTAGCGGGAGGGCGGT
GTTACAGAGCCTCTCGCACAGCGGACACAGATATTCTTTCTTTTCCACGTCGAAGGCAGC
AGGCTGGCGGCCGCGATACGGTCTGCGATTCTCCTTTTCAAGTACAGCATCAACATAATT
CCTACAGCAGCGAGCGTGGAGCGCATGACCACAGCTCGAGACGTGAGGCTGGGGCCTGAT
GCCAGCAGGCAGCCAGGCGTCCCGACTCCTCTCGTTGTCTCCAGCATCTCTGATCCGGCT
CAGCACACCAGATTGTTGTACGAAGGCCACTAATACTAGCGGTTCTCCCGTTCCGTCGAC
GCGTGCCTCTTCTTGGCACATGATGCAGACCCGCGGAGGTTCCGGGACTCCGCCCCCCCA
CACTCCGAGAGCAGCTCCGCAGTACAAAGGCCGAAGGTCCTGTTCTTCAGCTGTTACCTC
GGTGTTGGTTTCCTCGAACAATGTAGCGTTGTTGGATATGAAATTTTTCATTTGAGTTTT
CATCTGCGCCATCACCTTAGCTCTACGTTCCGCCGCTAACTTCGCGCGACGTTCCTTTTC
CGCTTCTGCTTCGGCTGCGTTCGGTTTCTCTTCTTGATCAGTTTCCATTTTCTGTTCGTC
TTGGTCGTCCGTTTCTCCTAACAGAGCTTTTATCCTAGTGAGCACCCATTTGGCGAGATG
TCTGTGCGCGTCCACTCTGGGACTGGCCACCAGCTTCTGTAGCAGCGCCACCAGGCCGCA
ACGATTCGCACTTTCGGCGAACGCTAAGAATTCGTAGTGGCCGCTCTCTTCGTCTCGAAT
TGCGTAGCCCATTAAGTGGAGCGCCTTGTGCACTTGCGTCTCGGAGAAGGCGCGCGCCCG
CAGGTCGAGGGCCCGCAGCAGCACGGTCCGCAGCACGAGCAGCGCCGCGTCGCTCTGCAG
CAGGTGCGCCAGCATCGAGAACGGCGGCGACAGCTTCGGCAGCACCGGCGGCGGGCAGCA
CTCCGACAGGCCGGCAGCCTTCCTTCTGTTCCTTTGTTCCTCTTCGCTCCTGGACAGTTC
TTCTCTTGTGTAATGATAGAAGAAAGTGTCGTATTCATCGTACAAGTGCGATTTGAGTTT
GTAGAGACCGCGGTTCGTGCCGCTCGTTGGCTTCACGAAGTCCGCCACCTCGTTGATGAC
AGATTCGAGACCAGTTTCGTGCAGTTGATCCTCTGGTAGACACCTGTTGAGTTCCGAGTG
TGGCATCGGTTTAACACAGAGCATTTGTATAATCTCTTTTTTTGTTCTGTCTTCGTTGGT
CACTTCCCCGACGCCGGGCACGTGGCGAGAACCGACAATAGTAATTAGTAGCCCCAGGAA
CTCTTCCACCATGCTAATTGTGTGTCTCAGTGTGTCGTCCTCGATGCTTTGCTTCTCGAA
TTCAGGTGACGCCCAGTCCAGTAGGTTGTACTTGTTCAGTACGTGTATCATGAATTCGTT
GCTTTCGATTAGAGATGCGCCAATTTGCAGCATGACGACGTCCCGATCTAACATCTCGGT
CCGACACTTCACGTTGTGGTAGAAATACAGCTGATTGAGTAAGGCGAAGCCGTTCCTCCG
CCACATGCCGGCGTGAACTTGGGCTATCATCGCCATTGTCTGCAGCACTGGCTCGATGAG
TTCCTCCGGCGACGATTTTTGTTTGTCCTGTCGATCGAACTCCGGGCTGTGGTAGGACAG
GCCGTGGCGGTGCAGCAGCAGGTGCAGGCCCGCAATGTACCGCGACAGGGGACGATGGAT
CGACACCGGGTCCACGGAGACGTCGTACGGGATCACGGACGCGCTCTGGTTACCCAGCTC
TTTGAGCTGTCGCGGCGCGGGCGCGGTGGCGGCGGCGT
(2318 bp)

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