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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12033_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_histone_deacetylase_5_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010830 P regulation of myotube differentiation
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0040029 P regulation of gene expression, epigenetic
GO:0046872 F metal ion binding
GO:0070932 P histone H3 deacetylation
Transcript
Level		FPKM:2.09 TPM:2.10
ORF EntryO_BomoSK10066_5prime_partial:A_BomoSK_comp12033_c0_seq2
Sequence
(Nucleotide)
CTGGAACAGCAAACTTGGTCGCTCAACGCACGAAATGAATCGACGGGACGCTTATAAAAT
TATAATTTTTTTTTTATCGGCTTCATTTATTTGAGCTGTCATTATGGGTAGGTACAGTAC
ATCGACTGGATTCGTGCCCCCGAACTTTCCCCGACGCCACCGCGCCGTGTGGGTGTCAGA
GCTTGCTCTTATATGAACGTGAACATAGAACCGGCGCAGAAGCTGGGGGGTCTCATCATG
AGGACGGGGTCAGCCCTGTCGCGTACCTTGGCGATGGGCATGATGACGGAGCGGAAGGCG
GCCAGGTACTCCGCGTCCCCCAGGGGCGGGTCGGTGCCGCAGCTCCAGGGCACGTTCACG
TTGTAGCCGAGCCCCGGGCCGGCGCCGCACTCGGTGGCCGCTCCCGTTCCAGGGAAGAAG
TTCCCGTCGTCGTGCCGGTGGATGCTCATGTACAGCACGTGAGGATCCTCGTAGAATATC
TGCTGGGTGCCGTTGCCGTGATGCACGTCCCAGTCGACGATGAGTATCCTCTGCAGCCCC
AGCCTGGTGTGCAGCACGCGGGCGGCGATGGCCACGTTGTTGAAGAAACAGAAGCCCATC
GCCTGGTTGGGCTCCGCGTGGTGACCGGGGGGCCGCACCACCGCGAACCCGTTCCGGAGG
TGTCCGCGCGCGGTGCGCAGCGCCAGGTCCAGCAGGGCT
(699 bp)

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