SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12016_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:20.22 TPM:20.33
ORF EntryO_BomoSK10034_complete:A_BomoSK_comp12016_c0_seq1
Sequence
(Nucleotide)
CGGACATTTCAACTTTTTAATTTGTGAACACTGCGAATCACTATCGCTAATTTGTAAGCT
GTTAGCTGCGATACAAACTTTTTATTTTCTGTAAGCATTTTTAGTGCTGATTTGAAAGAA
ACTGAAAATGGATACTTCTATGACTGGCAATGAAATACGAAAGACCTTTATTGATTTTTT
TATTAAAAAGGGTCATAAATATGTACATTCCTCGTCTACCATACCCTTAGATGATCCGAC
ATTACTGTTTGCAAATGCAGGGATGAATCAATTTAAACCAATTTTCTTAGGTTCCGTAGA
TCCAAATTCTGATATGGCTCAGTATATTCGAGTAGTTAACACCCAAAAATGTATTAGAGC
AGGTGGAAAACACAATGATTTGGATGACGTAGGAAAAGATGTATATCATCATACATTTTT
TGAAATGATGGGAAACTGGTCATTTGGTGACTACTTTAAAAAAGAAATATGTGCTTGGGC
TTGGGAACTGTTAACTGATGTTTTTAAATTATCTAGAGAGAGATTGTATGTAACATATTT
TGGAGGAGACCCTTCATCTGGTCTTGAACCTGATCTCGAATGCAAAAACATTTGGTTAAA
CTTGGGAGTCCCAGAGGCACACATTTTGCCTGGAAGCATGAAGGATAATTTTTGGGAAAT
GGGTGAAACAGGTCCTTGTGGCCCGTGTTCAGAACTGCACTATGATCGAATCGGAGAACG
AGAAGCTGCCCATCTTGTAAACATGGATGATCCAGACGTGTTGGAAATTTGGAATCTAGT
GTTTATCCAATTCAATAGGGAAACAGATGGTTCCCTGAAATTATTACCAAAAAAACATAT
AGATTGTGGTTTAGGTCTTGAAAGGTTAGTATCTGTAATTCAAAACAAACGAGCTAATTA
TGATACTGATTTCTTCATGCCAATATTCAAAGCTATTGAAAACGCTACTGGTGTGAGACC
ATATTCTGGAAAAGTTGGGATTGATGATGTTGATGGAATAGACATGGCGTATCGTGTCTT
GGCTGACCATGCTAGAACTCTAACAATTGCTTTATCAGATGGTGGTTGCCCTGATAACAC
AGGTAGAGGATACGTTCTTCGTAGAATTTTGAGAAGAGCTGTGCGATATGCGTCAGAAAA
ATTAAATGCCAAGCCTGGATTTTTTGGATCTTTGGTTTATACTGTAGTTGAATTACTAGG
TGATGTTTTCCCAGAAATTAAAAAGGATCCAGATTCCATTGTGCATGTCATAAATGAAGA
AGAAGTGCAATTTTTAAAAACCCTATTGCGAGGAAGAAATTTACTTTACAGAACAATAGA
GAAGCTCAATAATTCGAAAACCTTACCTGGTGACGTGGCATGGCGTTTATATGATACTTA
CGGATTTCCTATTGATTTGACTCAATTAATGTGTGAAGAAAAGGGTCTTAATGTAGACAT
GGAAGGTTATGAAAAATCCAGAAAAGAATCTCAATTAGTTTCACAAGGAAAAACCGCAGG
CCAGGAAGACTTGATAGCATTAGATGTACACGCTATTAGTCATCTACAGGATACTGGAAT
TCCTGCTACAGATGATTCTCCAAAATATAATTATTTACCATCATCTACTGACAAAGATGC
ACTCTATACATTTGCTCCGTGTACAGCAAAAATTGTCGCATTAAGGAAAAATAAGGAGTT
TGTAAGTGAAATAAGTTCGGGACAGGAATGTGGTGTAATACTAGATCGCACTAGCTTTTA
TGCTGAACAAGGAGGCCAAATCTTCGATGAAGGTTATATGGTAAAAATTGATGACGAAAC
TGTTGAATTTACAGTAAAAAATGTTCAAGTAAAAGGAGGCTATGTTCTCCACGCAGGAAA
GGTCGAGGGAATTTTAAAAGTAGGAGATACTCTATCCCTGCACATTGATACAGAAAGACG
AAGACTTGTTATGAATAATCACACTGGAACCCATGTTCTTAATAACGTTCTAAGAAAAGT
TCTTGGCAATGATTCAGATCAACGTGGATCGCTAGTAATGCCAGACAGGCTTCGATTTGA
TTTTACTAATAAAGGTCCCATGACAATAAAACAGATCAAAGATACGGAAAACGAAATAAA
AGAAATCATTGCGAAAAATAAAACAGTATACGCAAACTACACAAGCTTGTCTGAAGCAAA
AAAAATTAACGGATTGCGGGCAATGTTCGATGAACATTATCCTGATCCAGTTAGAGTCGT
ATCAGTAGGAGTACCCGTGGAAGACCTTATAAAAAATCCAGACGCTCCTACAGGATTCGA
AACATCTGTTGAATTTTGTGGTGGATCCCACTTACACCGGACTAGCCATATTGGGGAATA
TGTCATTGTGAGTGAAGAAGGTATTGCAAAAGGAATCAGAAGAATTGTTGCAGTGACTGG
ACCAGAAGCGATAAAAGCTATCAACAAATTAAGTGTTCTTGAAAACGAGGTTAATAATGT
TGCCAATTTTATAAAAGAACAAAATGAAAGTATTTCTCATAAAGAAGTATCTAAGAAAAT
AGTGGATCTGACGAACGAGATATCCCAAGCCCAAATATCATATTGGAAAAAAGATGAATT
AAGAAATATGCTGAAGAACTTAAAAAAACAACTAGATGATAAAGAAAGAGCCGAAAAAGC
TATAATTATTACTCAAGTCACAGAAAAAGCAAAAGAGCTATGTCTTGAACGCAAAGAATC
AAAATATATTGTATCCGAATTAAAGGCGTTTGGAAATACCAAAGCTTTAGATGGTGCTTT
AAAACAAGTGAAACAATTTTGCCCAAACTCAGCTGCGATGTTCTTTTCTGTTGATAAAGA
CGCTAATAAGATTTATTGCTTGGCAGCTGTGCCCAAAAGTGATGTAGAAAAGGGATTGTT
AGCTTCAGAATGGGTGCAATCCGTTGTAGACATTATAGGTGGCAAAGGTGGTGGCAAAGC
TGAGTCAGCTCAAGCATCTGGGAACAATCCTAATAGTTTAAATGAAGCTATCCAAATTGC
AAATGAATATGCTAAGTCTAAATTAAATTAAATAAACGTACAACACGTGCATAAATATAA
TATATTATGTGAATATTGTTTTGTCAAAATATAAATAAACTGTGATTAAAATAAAAAAAA
AAA
(3123 bp)

- SilkBase 1999-2023 -