SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10515_c0_seq1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		uncharacterized_LOC106115108_[Papilio_xuthus]
Ontology
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000185 P obsolete activation of MAPKKK activity
GO:0001047 F core promoter sequence-specific DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006469 P negative regulation of protein kinase activity
GO:0006915 P apoptotic process
GO:0006950 P response to stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007098 P centrosome cycle
GO:0042770 P signal transduction in response to DNA damage
GO:0043065 P positive regulation of apoptotic process
GO:0046330 P positive regulation of JNK cascade
GO:0051726 P regulation of cell cycle
GO:0071260 P cellular response to mechanical stimulus
GO:0071479 P cellular response to ionizing radiation
GO:0071850 P regulation of cell cycle
GO:1900745 P positive regulation of p38MAPK cascade
GO:2000379 P positive regulation of reactive oxygen species metabolic process
Transcript
Level		FPKM:3.90 TPM:3.92
ORF EntryO_BomoSK7329_5prime_partial:A_BomoSK_comp10515_c0_seq1
Sequence
(Nucleotide)
TTTTTTTACAAATAAAATAAAATTTTATTCATGTTTATTATGTTTTAACTTTTACAAAAG
ATTTATTACGAAATTGGTATAAAGATATAATAAATACATTTTTCGTTACATTAAACTATC
TTATGAAACAATGAAAAAAACACTTTTACATTTTAAGACAGTAGCAGTTTAGCACCTACA
TTTTACAAATTGCTCTCTATCAATTTTTAAATTATTTTAATTCAAAACAAACCCCAAAAC
ATTCTCAAGCAGACTTAATGCAACTACCAAACAACAGATGGCGTTGTGCCTAAGCCAAAA
TGGCGACCTACTTGAAAAATAATATCGCAAAATTTTCTTTTCACAATAATATCCTCATGT
TTAATTCACTTCTCGGGCAACTTGATGACGGGCATTTGTGAATAGCCCCAGTCTGATTCG
CAGTGGTCGATCAACTGTCTCTCGGCTTCAGATAATGTTGATAAATCTATTTCTTGACTG
TCTGTGAATGGATCTGTATACGGATAGTGTACCAGCACGCAACTGAAGTCCATGGGAGAG
CAGTAACCAAGCATTCTCCTCAGCTTAGTCTCACAATCGACCTGTGTACAAAGAAACGAA
TTTGTTAGCTTTTTTATTTTGATTCCTTTTAACTTAATTCCTTGAATCGTTATAAATTCG
ATTAATAGGTTCTTGTTAGAGAGTCGGAAATTTTAATGACTTTTTTTACTTCGTGGAAAC
TAAATTGTCATATAAAATTAATAATAACTATGTATAATTCATTTTATGAAGAAGGAAATA
AAATGAAACTCACTTTAATAACATGAATATCATTTTCAACGCAAAATGCTTGCAGGAGGA
CATCTTGCATATGCGTTGCACTATCGCCAGGCGGGGCTTCGGCGGTCAGGCAAAACAATG
CACCATTGCAGTTCTTCGATAAGTATTGAATGGCGGGAAGTAAGCCAATAGTTAACCTTT
TTTCGACACAGGCTCGCCTTAACACTGTCTTGATACATTGTCCGATAGAGCTGTGGGAAA
ACAAATACATTAATAAATTATATGTTACCAAAAACTTTAGTCTCTTGCATGTCAAACGGA
GATGCTAACCGCCATACTACAAACAAAATATTATTATCAAAAGCATAAGGTACGTCAATT
TATAGTCTAATTGGCATGTTTGAAGTTATTAGAACTTTAAAGTTCTTTGATCTAGGTCAA
GTGAAATTCTTGTGAAATATTCATTTTAGTTTATGCATATTGAATTTTTCCTGTTGTAGC
TGTAAAGTATTAAGATATTTATTTACCTTTTAGCTGCTATGACACTGAAGGTCTCGGCTT
TTACTGGAACAACTGCTTCCTTGTACATTTTGGATAGACGAATGCTTCTTAACTCTTGAA
TTTCACTAATTTCCAAACTCCGCAGTGAAATCCGAATGTGAATTTTCACAGAAAGCACTA
ACACTTTACATAAAATCCTTCTATTATGTAAACACACTTGAACTTCTCGCAGTAATTCGA
ACTTGTGACACAATAATTTCACAACTTTGCTAACGAAACTCGCGTTAGTACACTTTGGAT
GTTCAATGTAGAATGTCCGTGAAG
(1584 bp)

- SilkBase 1999-2023 -