SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10508_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_ER_degradation-enhancing_alpha-mannosidase-like_protein_3_isoform_X1_[Amyelois_transitella]
Ontology
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006486 P protein glycosylation
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.62 TPM:5.65
ORF EntryO_BomoSK7323_complete:A_BomoSK_comp10508_c0_seq2
Sequence
(Nucleotide)
TTAGTTTACCTATGTTTTGACTATGATTACTTCTACATGTTTCAACATGGGTAGTATTTA
AATTGTCTATAAGTTTAGATGATCGAGATTTTATCGGTAATTCGGTAAAATAATAAAAAG
AATACCAACCAATAATTATACCACTTATGGTGTCAATATTAGACAAGAAAACAATAGATA
TATTGTTTAAAAACCATATAAAACATAATAATAATTTTTGTCCTTATTATCCTGTTCAGA
ATAATAGGCCATAAGAACAAAAGTTACCTATGTAAGTACTGTCATATGTTTTTGCCACGT
GCGCATTTTTTAATCAAATTTCTTATTTTGTTAAAATTACGTTAAGTTTTCATTATATGA
AAAAACCAAGTTACTAAAACCGCGTACCTAGAAACCGAATGAATCAATTCCAAAATTGTT
TTTGCAAAAAATAGATCCAACTTTATGCACCTCATGTCGAGAAATAGTTGCGACTATATT
AGATTAAAAACATAATTCTAAAAACAAAAACTCATGTGGAATGTTCCAACAAACGTACTG
AGAACATTTGACGCTGATAATTCCAGTACAATAAAACGGTAGATAATTAAATAAATCGGT
ATATTAATATATATTTACAACTTAGATTATAGTATAGTCATGGTCTTATCCATTTTGCAC
ACAATATTAATAAAAACTGTGGCTGTATGTACAATTGCTAGTTTTGTACGACCCAGTAAA
TCCGATTCGGTGTAAAAAAAATGAATTATTTACACTATTTTATAACACAGGGTAACAATT
TTCATTAAAATGATGGTTACATATATCTATTATATAATTTATTTGATGTTAATTAAATGT
GCAACGATGTTAGTGCGATAGGGGTGTGTTAATCCGATTTATACGTTAATCGGCAACACG
AGATATGTCTTGCCATCAACAAAACAATAGTGAATTAAAATGTTTATCGACGAGATTATA
ATATAAGAACGAATAAAGACGAAAATTTTTTTTATGACATATTATTTAAAATATTTCAAT
AGTAGTTCTCAAGTATATAGTACCTACTGAGTAAATTATATTGTTCTTAAACTTTTTTGT
GTAACAATTAAATTTGTTAATTTTCATGTTTATTATTAATCAACTGTCACCCCTCTCGCA
CTGCTTCGTTGTCTGAGAAACAGTCGTTTTTTTAATTGAAAACGTTAAACGATACTGCCA
AACTATAATCACGTTAAAATCATAAAAAAATATATTTATATCTCATTTTTTTCCCAGAAT
TCTTATCATATTTATTGCTCTTAAATTAAAACAACTAAAGTGGCAATTACTTAAAAGGCA
CGAAAATTCTTAACAGTGTTATTAAATCTTAGATTCAATTATGTACATATTATACACAGC
ATTTATCTTGTTTACAATATATATATTTTTCTTTCTTATTCGCATACGTTCCCGATGTAT
TGAGTGTGTCAGAGTTCATCGGGTTTATTTTTATTTGCTTCACCCGTATCTTGAACACTT
TCTTTCGGTGCAACTTCTGACGGACCCACAGGTTCGATGGTAACTGATTGCTGTATGGTT
TTCACAGAACTTGTTTTACGGGCTACGTTATGAACGAATTCCCCCTTCTCTAAGTGAATG
CTCTCAGCGATTTCTTCGGCGCATGAATTTTGCGTATTACCTTCTTCGTTCGAGAGCGAC
AATTCGAATTGAGCAACCAACTGGCTTAGAACCTTTTTTAAATGATCGAAGGATTCTTTG
TCCGCCGGTAAGTTCTGTGAATCGACCACGGCCTCGCAGCCGCCTTCATCGCAGGAATTA
TCGTAGTGCTTCTTTAAGTTTTTAAGTTCGCCCACGGTCACGGTGAGCTCGGGGTTATTC
TTTAAAGCGTTCGATAAATATTCGCCTTCTTTCGAGAACAGGAAAACTGCGGGTATTTCG
ATGTCGTCGTTACCGTCGCCGGACATCGCGAACAGAGCGGTCGTCTCGTGTGTCGAGTCC
GGAATGTTGTCTATTATGATGGCCAGTTTGACGCCGGCCTTTTGCATGTTTCGCACTTTC
TGAGCGAACGTGCAATGGCCGCGTTTCGCGATACCGAAACCGTTCGAAATCTCCTCTTCG
TTTTCAACAGGGGTGCACGCGTCGATAGGGGTCACGAATGTAAGGGTGTTTGTGTGGCGT
TCGTTTCCTGTTATTTCCTTCCCGAAGTGCGCTGGTCCGGCAGGAAAGATTTTATCGTCG
ATTTTCACACCGGCCGGTATGACTCCGTTTTCGAAATCACTAAGCGAGTTCCATTTGGCC
ATCTCCCGCATGAACGTCAAGCCTTCAGCGGCGTCTTTCGCCGATTTAGCTGTGTTGATA
GTATAAAGCAGCTGTACTCTACCATCGGGAAGAGTCAGTACTGATATACCCATGTCGGAG
AGAGCGTTAATCTGGCGAGGGTCATTGAGTGGACGCAGCCTCGCCGGCGGACGCGCCGCG
GTCGAGCCCAGCAGCTGGCGCATCGGCTGACGTACTTTCTCGGGCACAAGCGACGCTGTA
TTCGGGCACGTTTTTCTATATTTATCTTCGTCGGGATCGTCGATCTTCAATGTGAAATAC
GACGTGTTCTTTCCTACGGTTGCCAACGACAGCGGCAGGAAATGTGCTTCAGTTGTCAAT
ACGTAATCTTCCAGTTTGATCGGGAAATCCTTCTCGTCGCCGAACAGCATGTATAAGTAT
TTGAATGTCTCCGCGAGCACGAACGAGTCCATTCGGTCCTCGTGTGCGCGCGTTCTGACG
TCATTCACGGACGCGTATCCGCACGGCACGCGCGTGTGCTGCTGCAACGCTTTCAGCACG
GTCTTGCCGACTTGCAAATAGTGATCGTCTTCGGTGGCGCGATGCAAGAAATAAGTCGAC
TCCAAAAACTCTGGCCGCAACGGATGCTGTCCCCAGTGCACCTGAAAGTCGGAAGTGAAA
GCTTCCGGTATGAAAGTGTGCCTCTGCATTACTTGGTAGAGCATCTCGTGAGTTTCGACG
GCCGGTCGGACGTCGCCCAGTAGTACCTGTAGCCCAGGCCAGAACGCCAACAGGGCATCC
ATGAAATTACGGGACTGGAGATGCGGTCGGTGCATGTGCACGGCCAACATTACGGGACCT
CTACTTATGTACTTCATGATGGCGTTGTAGTGCCTAGTAAATCGGGCAAGATATTTTTCA
TCACCAAGGAGTATGTATGCTTTCAAGCAATATTCATAGTAAGAGTCTATTCCGGCACCG
ACTCCGGAATCTTTACGAACCCAGTCACCGGAGTGAATGTTTATAACTGTCCCCATGAGG
TCCGAGGTTCTGTGTCTTATTTTCCAGAGACGATCCATAGATTTATGCGCTTTCTGTTCG
TAAATAGGGTTTCCGGTGAGTCGTGTCAGAGCTGCCATCTCTAGAATCATCGTTCCCGCG
CACGCAGTGCATGTCTCCCGTGATTCGGTTAAGTCTCGTATACCATGTCTGAGGTTTATC
TTTCCATGAGGTATGCCAGTGGATGTATTGAAAGCAGGTAACAACCTTTTCCCTAAATCT
TCTGCCATCGTCAACAATTCATTGTTATACCATTGCAATAATGGAATATCGCTCTTCAAC
GTTTCCGCCAATACGTGAGCAGACAATAGACCCCCCAGCATCCTAATATTTGTTTCAAAG
ACTGAAACAACAATATCTTGGTCAAAAGAGACATCTTTTATAACGAGTTGGATTGCATGA
TTAAATTCCGAAAAGTCCCCCATCACAACTAAAGTGTCTAAGCTGTCCACCAATGTCAAT
GAGAAATTTCCTAAAGCATCATCCATATCTCCACGACTCGGTGTAATTCCTTTCCATCTG
CCCTTGCA
(3848 bp)

- SilkBase 1999-2023 -