SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10507_c0_seq1
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006457 P protein folding
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:4.55 TPM:4.58
ORF EntryO_BomoSK7320_5prime_partial:A_BomoSK_comp10507_c0_seq1
Sequence
(Nucleotide)
ATTCTCTGCTGTATTTAGTAAAAATCAAGTCCATCATATTATATCTTCTTATGATATAAT
ATTGGCATATTATGAATCTAAAGCATGTAATTTACTCGCCAATCAATACAAATGTTTTAT
CTTGATATTATATTTTCTTTTATTACATTATTATATTTTTTATTATAATAATATTATAAT
AAAAAAGCACATGCATTAAGCTTAAGCAGCTTATTTTGAATGTATGTAACAGCAACCTCG
ATTGCGACTAGCTACAGTACAAGTAGCTGTTTCATTAAATACAAAAGAAAAACAGACATT
AAAGACTTCCAATAATAAGTTGTTTGGATATTTGATTTTAAAATTACGAAATAAAATATT
TTATTGACAAAATAAACAGTTATGTACGTATAAAAAATACGTTAAAACAATGAAGTATAC
TATCTCTGTGACGTCACCATTTTTATAAATTAAGTGTAAGTCATACGAAAAACATACGTA
GTTTTCTATACCTTTCCTTAAATTAGTGGAATTGTTACCAAACTTAATTGTTTCTCTATT
AATCTCTAATAAAATAAAACTTAATCTAAGCGTAGTGTTGCCAGTTGATAAAATTTCATA
AATAAATTAATGGCGCTTTGCGTCTATGAATTTAATTAAAAAATGTTAACAAATAAAGAT
CACACGTAATATATTTTCTTGTGAAATATATTTTATAATTAATTACATGCATAATATTAA
AGATATTTTTTTCTAATTTATTATAATATGAACTTTGATATTAGTGTAGCGGCAGCAACA
ATAAGAAAAGAATTTGCTGCTTTAGACCTTTCGGTACTCTAGTACGTAGGTTTCAAAATA
ATTTATCGTGGGCAATTTTAGCACAAGCGGTTTTTAGTTTACGAAATTAAGAGTAAACCT
ACAGATCCAATGGTCGCCCGGCCACACGAGGGTTCCTATTCTATAATTAACTTTTCAGAT
TTATCATTATTATTTCATACATTATAACGTAACGTAGAAATTTTCTTCAGCATAACAATC
GATTTTAAGCTTATTTAAAAAAAAGGTTGCCTATTTTGGCAACATACACGTGTCAGTGTT
GCCAGTTTTATAACACAGACGAATATTTTAAAAACACTATGTATAATTAAGTTAATTCAA
AACTTCCCAAAATTTGTATAATTGTTAAATAACATGATATGTTTACGTAATATCATCACA
TACAGAAGTATTAGCTAATCAGTAATCAGCTACCTCTGCCGGAACTGGCATCCGAAATGG
CACCCTCCTTATCAAACTTCACGAGGCTGTCGCAATCCAGGTAGTCCATGTCAGTCAGCT
GCCTTTTCAGCATCAAGTGAGGAGTCTTCCTAACTCGTTTTTCCTTCAAAAATTTCGGAA
TCATCTCTCTGCCTTCCATTAGGTACTCTATGACCAATCTTTCGAACAGCAGCGCCACGA
CGAAGTTGGCTGCCGTGATGGCCAGCACCAGGTAGCACAGCAGGACGTCCTTCGGCATCC
GGAGCTGCAGGAACGAAGCCACCCAGGCGGCCGGCGACACGGCTATGTACACGCACAGTG
ACGTCATCACCAGCAGACTCGCCACGAACTTTCTGTTGCTGAGGATCGAGCGGCGGTGCG
GCGCGCCGTGGCTGAACACGATCGCCATTATCACGTACTGGAACATCGATATCGCGAAGA
TCACGTAGTTCTCCCAGCACTCGTTTTCTTCCTCGCCGGCGTACGTATGCCTCACGTACC
ACGGGAAGAACGTCAGGGCGTAGTAGCCGAAGTACTGCGCCACCGCGATTAACGACAGCT
GTCCCACCAGCGAGCACAGCGGCACCAGGCCCAGCAGGGACGTCAGCGGGGGCCTCTCGC
ACAACTTGCCCGAGTGGGCCTCAGTCATGCCGAAGAAGAAGGCGAAATTGACGATCAACG
CGATGTCGATGTACAGGAACTGGAAGTCGGTCAGGTTCGAGTCGAAGTAGTAGAGGAAGG
CGACGGAGAAGAACTCCGTGAGCGAGTAGCCCACCATGAACTTGAAGAGTCCGAAGCTGG
TGGCGAGCGCGG
(2052 bp)

- SilkBase 1999-2023 -