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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10505_c1_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_cyclin-H_[Amyelois_transitella]
Ontology
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070985 C transcription factor TFIIK complex
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:4.72 TPM:4.75
ORF EntryO_BomoSK7313_complete:A_BomoSK_comp10505_c1_seq1
Sequence
(Nucleotide)
TTAAATGTCAAACTTTTAACGATAGTCGCAAATTTCTGAATTTGAAGATTTTACAATCCG
CTTTTAGTTTCCAAGTAAAATATGTTTTCTACCAGCTCTCAAAGAAAATTTTGGACGTTC
AGTGATGAAAATGAACTCGCACGCTTACGTGAAAAACACAATTATTTTTTTTACGCGAGA
CAGAACTCGCACATCGACGAGCAACAACGTTTCACGTATTTCTTGTCTCCTGATGAAGAA
CGACAACTTTTAAAGCAATACGAACTCCATCTGAAAGAATTCTGCAAGAGATTCACACCT
CCAATGCCCAAAGGGGTGGTGGGCACAGCCTTTCATTACTTTAAACGATTTTATCTATAC
AACTCGACAATGGACTATCATCCAAAAGAAATTTTAGCCACTTGCGTGTATTTAGCGTGT
AAAGTTGAAGAATTTAACGTTTCTATCGGGCAATTCGTCGCCAATATCAAAGGAGATCGA
GAAAAAGCATCAGATATAATACTAAACAATGAATTATTGCTAATGCAACAATTAAACTAC
CATTTGACCATACATAATCCTTTCAGACCAGTAGAAGGATTCCTAATAGACATTAAAACT
AGATGTTCATTGGCTAATCCTGAACGTCTTCGTAGTGGTATTGATGAGTTCCTAGAAAAG
GTGTTCTTAACTGATGCATGCTTGTTGTATGCTCCGTCACAAATTGCTTTAGCTGCAGTA
CTCCATGCAGCGAGCAAGGAACAAGAGAACTTGGATAGCTACGTGACAGACATACTCTTC
AGAGATGCGGGACGTGATAAATTGGCGATACTTATTGAAGCTGTAAGAAAGATTCGATCA
TTAGTAAAAATGGTAGAGGCACCAGCTAGAGAACGAGTACGGCTTATAGAGAAGAAATTA
GACAAATGTCGGAACCAAGAAAATAACCCTGACAGTGAGATTTACAAGCGTCGGATGAGA
GAGCTGCTAGACGAAGACGATGTTTTACATGTAGGATCCAGTAGAATGTCTTTAGATACA
AGTGGAGTTACACAAGTTCTATCACCTTCTGCCTCTTAAATAAAAGAAATAAAAGTTGAC
CTAATATTAATTAAAATAAAAATGTAGATAAGATTATTGACTGTAAATTTAAATAAAGTA
ATTCTTAAGTAGGATTTAAAATAACTAAGTACACCTTTCATGATATTTTATGTATGCTGT
TTTTGCAACAAAAGAATCCTGTATTTCTGTAATGTGTGCTAGAACGGGATGAACTATGGT
AGAACTTGTAAGTTCGGTGTCATGAAAGCAATATACTATGTAGTCACCTTAAGTATATTT
GAAGTTTAGCCTAGGACTTATGGTTGTACTTACCATTATCTTGTATTAAATCTGTTCTGA
TCTATTGCAAACTGCAGGTCTCAAAAGCTTTTTCTACACACACTAAAAAACAAATACTTA
TGACCTTAGTTAAAGAAAATGGATGTGGTTAGTTTATATTTATTGCTTAGATGGGTGGAT
AAAGGAATAACATCGTGCATTAAAATAAAAACGGACAAAAAAAATTTCATATGCGTTATT
ACTGGTGGTATATTAAGTAAGCAGTAATGCGGTTTAGGTTTAATCAATCTGGTTTTCACA
ACTATTATACACATATTTATATGGCTTTTATTATTATTCAAATATACCTATTACGTGCTG
TACAAGAATCATGATTAAATATACAATTTGATTGTAATAACAATTAATATACAATATTTT
TTTACTAAATCCATTCAATTTTACTTGTAAAGATTATACACAGCATGAATTTTGCACAAT
ACGTCACCGGTATAGCTACAGATATACTTGCTATTACGCGTCGGTGACGCAAACCAATAA
GATTTCCCCGAACAAAAAATACTCAACGCGGCAAAAGAAACTATCACTAGAAGCTATCAC
TTCTAAAAACAATTCTGCTCGCAACTTCACCACAAGTGACGTCGGCTCATACGAAGCCAT
ATATTAATTGCGATTCTATCACAATGAATTTCATTATGATCCTGTAATAAGTATTATTGG
ATTATATTTATTTAACGGTTCATATTTGCGCTATGATCCAATATAGATCGATTATGTAAT
GCGTCTCTTTATCTTTAAACAATCCGATGGACAGTCGACCTTTAAGACGATAAATATCAC
GATTACGGTGTGCCACTTTTATGAAGAAAAAAATATTTTAACACAACCCTTATTAATATT
GTTACCTTTTAATGTCTGCAACAAAATTAAATTATCTATTAGTGACGTACATATGGCTTC
TGAATTATTTGACAAACTGGTCCATGTCTGCGATATGCTACAAAAAAATTGCAACGTTCT
CATAAAATGATAACGAAAATAAATATAATATATATATTTTTTTTATTCAAACTATATTAC
GTGACAAATACTACCAAAAAGGTTACACACGTGTAGATCCTACGGACCCGTAACGATATA
ATCTGTGGCACAATAAAAAACCGCGAAAACGATGACAGTGTCAAAACAGCTACATTGTAC
TTCGCGGAACTCAAAGTCCCGAAAAATTATCGAGTGGTGGATGCATTAGGACCGCGGACC
ACAGCACTCCTACTTTATTCATATAGAACGCAGTCAACTAAAAACCAAACGACTGAGTCG
TGGATTTTTTCAAATAATAACTGTACTCCTGCACCAACCGATTTCTCTTTGGAAAAACAT
TGCAATAATTAATTATAAAACACTACTTAATCGTAAAACTAATATACTACGGTATTTTCG
CCGTCTTATAAATTAAAATCGATTAATTATTTGGTAAAAAAAAAACAAACATTTATCACA
TTAATTTAAAGACTAAACCTACATACCTATCTT
(2853 bp)

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