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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10500_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_polycomb_protein_Pcl_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007379 P segment specification
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0019827 P stem cell population maintenance
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048863 P stem cell differentiation
GO:0061086 P negative regulation of histone H3-K27 methylation
GO:0061087 P positive regulation of histone H3-K27 methylation
Transcript
Level		FPKM:4.24 TPM:4.26
ORF EntryO_BomoSK7298_5prime_partial:A_BomoSK_comp10500_c0_seq1
Sequence
(Nucleotide)
GAAGATATTATTTAGGAACAATAATAGAGTTAAGTACGAGTAATGACAACGACTTGTGTG
AGGTGGGCGCAAGCGTGGCCCGATGCTTAGTCAAGTTCGGCGACGGCACGCACTCATGGG
CGCCAGTGTCGTCGCTAAAGCTGCTCAGCGTACCGCCCGCCGATGACGGTCGCATCATGT
GCGTGGTGTGCAAGCGACGCGAGGGGCCTGCCACTGGACCGGCCACCAACGCTATCATCG
CGTGCGACATGTGTGGCAGGGGCTACCACGCCAAATGTCACTCGCCCCCCGTCGATGCCT
GGATCAATGGTGCATCATGGCATTGTAAAAGGTGTGTTGACCAAAGATACAGAGTAGCAG
CAGCAGAAAACCGGGCATTGAAACGCTCAGATCTATTCAGGTTCAAAGGAGGACAACAAC
GAAGGCAACAGCAGGAGCTCACTCCACCTTGTGATACTGCATCCACTACTTCATCAACCG
CATCTGAAGCTGGAAAAGATCAAAATGAAGCACATTGTTATTGTGGCGAAAAGAGTGATT
GGCTTGCTCAGATGTTGCTGTGCTGTCGTTGCAGCCGTTGGTTTCACCAAAGATGTGTTT
CAAGTCTACAATATCCTCTCTATGCAGGAGATAAGTTGTATATATTCGCTTGTGCTAGCT
GTAACGGTGGTTCGGAGTATCTACGGCGGCTCGAGTTATGCTGGCTGGACCTGGCGCATC
TTGCGCTATACAACCTCACCGCCTACAACGCGCCCAACTACTTTGATCTCGATAATGTAA
TCATGCCGTACATTATGGACAACTGGCACGCCCTGCAGTTACCCGAGAAAATGTGGCGAA
CTCCCGTAAATGAACGACGGGAGAAAATTCTAACAGCACTCACTTCGTCTCGAAAAAGAT
TCAAATGTGGTCGAGAGATGAAAAAACGAGCTACAATCTGGGGTCTCCGTCTCCGTCGAC
CTCCACCACCTCCGATGCAACTTTCAGCTTTAGAACAGATAAAGAAGGGAGAACCATTGA
CGGACGACTTGGTGCAACAACACGCTCCCAGACTCCGGTTTCTACCTCGTGCTCCTACAC
CGAAATCTGTTGTTGATGATAGTTCTCAGCCCTCTAGCAGCAATCCTGTAAAATGTTCCT
ATAAAAGTAACCATCAACGAATGATTGTTCCCGTTGATGGCCACTGGTTAAATTTAATGA
TGGGCAAACGGTTCCATGAGAACCTTAACTCAAACTCAAATTCAGAAAACGATTCTGCCA
GTTCCTACGAGTCCATCAAGCTTATTGAGGCTGATGAACAAAACTCACCGTCCGTGTCTA
CAACTAATAGAAAATCTGAAGCCAAAGTTGATAATGTAGAAAATATAAAAGAAACCCGAT
CCAATGATAAACTAAGCTATGAAGAAGACCCTCCGATATCAGTGCCATCAGTAGTTCCGT
GTTCAGTAAAGTTAGATAAAATATCCAAAGAGAATGTTGATCAGACTAGTATCTCTAAAA
GTGAAGAAACTCATTTAAATTACAATGCCCATACAACAAGAATAGCTACAATGAATTTGG
AAGTATCCAAGCTGTCCACAAAAAACATAATTGAACATTCCAAAATAATGTCACTGCAAC
ATATGGAAACTGTACCATCATACACTAGCTTTAACCATGACCTAGAATCGTCTGGAGATG
AAACTTCAAGTAGAGGAACTTTGGATGCTATTATACCGCCCCTGAAGAATTTTCAGGGAA
GAAATAATCCTTTTTTGATGCAAAATACATCATCAAAAAAACCATTTTCGTCAATGACGA
ATATTTACCTTAAACCAAATAAAAAAGTGAACAATTTTCACTCAAGGTTTTCTTTGCCAG
TACTGTTCAATCCCACAATGGGACCATTAATAAGACCTACGAAAAGAAAACTTAGTGAAA
AGGATATTGTTATTGGACCAAATGGAGAGGTGAAGCGAAGAAAATATCGACGACCAAGAA
AGTATTTACAAATGCAGTTAAACAAATCATGCCCCCTGCCTGATGACAGTAATAAGACTG
CACCAACGCCGATGCCAACAGACAATGTCGAAGCACCATCTCAAACAGGGCACATCAATA
ACGTGAAATTTCACGGTAGAAGACTGAGACAAAGACAGGAAAAAAACTATTACGAGAATG
CTAGACGGAACACGAATAGTAATAACACGGGTAATAACAACAGTGTGAAAAGTCTGCAGC
TGAGCCCTCACAAATCGAACAGTAGTGCAAATGAAGTGAACGCTGAACAATTATCTGCTC
TGAAGTCGAGTGTCCAGTCATACTTCCGCGCAGAGCAGACTTTCCGTGTACTGGCCAGAC
GACTCTGTCCGGGCGCGCCTCCTGCCTACCTCATTGAATGGGACTCCAACACATCATAAA
ACTATAATATATAAATATATATATGTGGCTCAATTGATTGTATGTCTATTGTAATAAAAT
TATTTTTCTCTTTTGGAAAACTGATCTGTTATCTATGTTACATTAATTGTTGTGCTGCTT
ATTTAAGGTACGTAGTCGCGTGGAAAATGTCTGTCTACACGTGTATGTACTCATTATTGA
AAGACTGCTACGGCGTAGTCAAATTAAGTATGATGACGATTACATTTGTGAGCAAGTGAA
TATGACTTGTTTTTAATATGTGTAAATGGGTTTTACATGAATTTATTTAAATGTCTATAC
ATGTAATGTATGTAATAGTTTTTTGTCTGTAT
(2732 bp)

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