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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10467_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_vacuolar_protein_sorting-associated_protein_52_homolog_isoform_X1_[Amyelois_transitella]
Ontology
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0010668 P ectodermal cell differentiation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019905 F syntaxin binding
GO:0032456 P endocytic recycling
GO:0048471 C perinuclear region of cytoplasm
GO:0048611 P embryonic ectodermal digestive tract development
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
Transcript
Level		FPKM:5.92 TPM:5.95
ORF EntryO_BomoSK7245_complete:A_BomoSK_comp10467_c0_seq1
Sequence
(Nucleotide)
GTTTAAAACAACAAAAAAAATTAAATACAAAACCTAAAAATTCAAGTAAAATGTATGTGA
ATAGTTGAAAACGCACACAGTCAAGTATAAATGTTGATTTCCCGTCATTCCACTAGAGTT
TAATCATGTCTGATAACAACAACATGAACTTAGACAAAAATCTTGAGGATTTCGAAATCC
AAGAGGTTCTCCGTAATGGTACAGATTTGCGAGAATATGCTCTTCAAATCGACAAAGGAA
TCATCGAAGCTGAAAAAGCATCTGTTGCGGATTATTTGAGAGAAAGTGAGAATATTGGCT
CCCTTCATAATCAAATCGAAGAATGTGACAATATTTTAGGGAAAATGGAGAGTATGCTAC
TGGTGTTTCAGAATGATTTAGGAAGCATCAGCAATGAAATTATAAGTTTACAAAAGCGTT
CAGTGAATATGTCAGTACAGTTATCTAATAGACAAGTGCTTAAGGGACCTTTATCTGCAT
TCATAGAAGACATGGCAGTGTCGGAAACTGTTATATTTGGTATCAACAATGTTCCAGTTA
CCGACAAAGAATTCATGGTGCAGTTGGCAATTTTAAACCAAAAATTAAATTTTGTAAAGG
AACAAGATTTCAAAGAAACTAAAGCTTGTCATGATGTCAAAGACGTTTTGGAAAAATTAA
AGATAAAAGCAGTGTCAAAGATAAGAACATATATTTTAGAACAAATATATAAATTCAGAA
AACCAATGGCAAATTATCAAATACCACAAAATGCCATGCTGAAATACAAATTTTTCTTTG
AATTTGTATTGACCAATGAACGAAATGTGGCTCAAGAAATTTGCAATGAATATATTGATA
CATTGAGCAAAGTTTATTATTCATACTTCAAGTCATATGCATCAAGACTAGATAAATTGA
AATATGAAGAAGCACCCAACAAAGATGACTTAATGGGAATTGAGGATGGATCTAAAGGAG
GATTCTTCCAGAAATCTAATTTAAAAAATAAAAGTACAATATTCACTATAGGGAATAGAG
GTGATGTTCTGGCCCAACAACTAGAAGCACCCATTATTGTACCACATGTTCAGCAAAAAA
CAAAGTATTCATATGAAGCCTTATTTAGAAGTCTTCAATATGCCTTGGTAGACAATGGTT
GCAGAGAATATCTGTTTACCACTGAATTCTTCCATGTCAAAGGAAACCATGCACAAGAGC
TCTTTGATAGAATCCTCGGTAAAACATTGTCCGTGCTTGTAAAAAATGTGGAAAACTATG
TAGTTGAATGTTATGATTGTTTGGCACTATTTCTTTGTATCCAATTAATAAACAGATATA
AGTTAATGTGCCATAAAAGAGCAGTTGCGGCTCTGGACAGTTACTGGGAATCATTATACA
ACACTTTGTGGCCTCGGCTACAATATGTATTAAAACTGAACATTCAAAGCGTACGGGACT
GCGACCCTTCTAAACTGTCAAACAAGGAAATGGGACCGCATTATATAACACGAAGGTACG
CCGAATTTTCGGCAGCTATGCTGAGCCTCAGTGAACAATTCCCGTCTGAAGAACTCAGTA
AACTTCTGACTGTACTTCAGGATGAAGTCCATTGTTTTTTACTTAAAATGGCTGCAGAGT
TCCCTCAAAGAATACAACAGCTTATATTTTTAATTAATAATTACGACATGGTCCTCAGCA
TATTAATGGAAAGAACTAGAGACAACACAAAAGAAGCAGAAAGCTTCAGGGAACAATTAC
AGGGAAGAAGTTCAGAATATGTAGAAGAGATTCTCAGTCCACATTTTGGTGGAATGATAC
AGTTTGTCAAGGAATGTGAGCAATTGCTAGATGGTGATAAAAAGGCAGAATTAGCCGGAT
TAGAAAGAAAATCTCTATCCCTTGTAGCATCATTCAGTTCGGGATGGAAACAAAGTCTAG
AAGAAATACATAGAGAAGTGCTAGTATCGTTTCCAAATCTAGTTACCGGGTCAGGTCTGT
TGCAAATGGCGTTAACGAATTTCGTTCAATATTACCACAAATTTGTAAAACTTTTAACGC
CCAGTGCCCGTACTCAATTAGTTAATATACATGTGATAATGGTAGAAATAAAAAAATATA
AAACAAATTTTTAGAATCTTAGATTTCATTCCGACATGAGATCATATACATACACAAATA
CGTGATGATGATGATGATGATGATCATTACATGTAGTTGTTTATTTCCCAAATGGACGCA
TAAAATCAATCGAGTATTTCAGCACAATCAGTTTTAATGAAATAGTATTGCAATTCGAGC
ACTTGACATCATGTATATGACCTCTAATATATGTTTTATTTGTGAACTCTGGATTTTGTA
GTAAATATATGTTTAATGTATGTATTACATACCATACATATTACATACCAAACCTTAATT
ATTCCTCGAATGTTTCCAACATACTTGTCTCCGCGATGGACATCTAAACTACTGAACCGA
TTTTAACTACCTTTTTTTTTAAATATGTGTTTTGTTCCAGCTTAGGTCCTATGATGGTTT
TTATTTCGATTAATGCTCGCAATATTTATTAATTAACAAT
(2560 bp)

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