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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10344_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		Nep1_protein_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032040 C small-subunit processome
GO:0032259 P methylation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042742 P defense response to bacterium
GO:0070037 F rRNA (pseudouridine) methyltransferase activity
GO:0070475 P rRNA base methylation
Transcript
Level		FPKM:7.96 TPM:8.01
ORF EntryO_BomoSK7096_complete:A_BomoSK_comp10344_c0_seq1
Sequence
(Nucleotide)
TGTCCCTACTATATAGGTCTATGACACTGACAGTAGCATGACAGTAGTAAGCACGTGTTA
TTGTTTTGTTGATTCACGGAATTGAACTTTAGAAGTTAATTTTGTTTTCGAAACTAAATA
CTTTCCTGATGACGGTCGTAGTATATTGCTTTAAATAAGTCATAACATTGCAAGGTGCAT
TCTAAAATGGGTAAAAAAAGAAAATTGGTTTCTAAAGATGATGATTTTGAATTTGATCCG
ATTCCTAAACATTTGGTTACTTCACACATAAAAAAGCAGGAAAAACGTCTTATAGTTATC
CTGGAAAACGCACAACTGGAAAGCGTGAAAAATGGAAATAGCTTTGAGCTATTAAACTGT
GATGACCATGGTCACATTTTAAGAAAAAACGATCGTGATCCTGGTTCTTGTCGCCCAGAT
ATTACGCATCAGTCTCTCCTCATGTTGATGGACTCCCCGTTGAACAGAGCTGGCTTACTG
CAGGTCTATATTCATACAGAAAAAAATGTTTTAATCGAAATTAATCCACAAACAAGAATA
CCTAGAACATTCAAGCGTTTTGCTGGATTAATGGTTCAACTTCTACACAAGTTTGCAATT
AGAGCATCAGATGGGCCAATGAAACTTTTGAAAGTTATTAAAAATCCTGTCACGTCACAT
CTACCAGTTGGAGTCAAGAAAATTACTATGTCTTTTAGTTCTAAAATAGTTCAGAATTGC
AGAGATCTGGTCCCAAAAGACGAACCCATTGTGATGGTCATAGGTGCAATGGCTCATGGT
AAAGTTGAAGTAGACTACTCTGAAGATGTCATATCTATCAGCAATTATCCTTTATCAGCA
GCATTGACTTGTGCTAAACTTTGTTCAGCATTTGAAGAAGTTTGGGGAGTAGCATAAGTG
TTAAATTTAATTGTAAAATAAACCATCTTTCCCAAA
(936 bp)

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