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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10309_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		hypothetical_protein_KGM_00713_[Danaus_plexippus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.80 TPM:6.84
ORF EntryO_BomoSK7038_complete:A_BomoSK_comp10309_c0_seq1
Sequence
(Nucleotide)
GGAACTATGGGACCGCCACCAGGAGCTATGGGACCGCCACCGGGATCCATGGGGCCTCCA
CCAATGGGTCCGCCTGGACCACCACCTGTTAGCTCGTCTGGTGGACCTCCAAACATGCCG
CCGGGAATAGGTCCACCTCCACCAGGAATGATGCCTCCGGGAATGGGACCACCGCCAATG
GGGCCGCCTGGAATGGGTCCACCTCCAATGGGCCCCCCGGGTATGGGACCTCCTGGTATG
GGTCCACCCGGTATGGGACCTCCCGGAATGGGTCCTCCCGGAATGGGACCTCCAGGAATG
GGTCCACCCCGAATGCCACCAAATATGATGCGTAATAAGAATAATTATAATAATCAAAAT
ATGGACATGGGACCACCTGGGATGAGACCACCTATGGGACCATGGGATGGACCACCAGGC
CCACCTGGTCCACCTGGCCCCCCTGGGCCTGGGTGGGGAATGCAAAGTGATGGTCCGCCA
GGATGGAATGATCAAGATGATGATGATGAAGAAGAAGAAGAAGAAGATGGGGAAGAAGAT
TTATCCTCTGACCAACATTCTTCTCTGCCATCACTCTTGACCATGAAGATTGAAACACCA
GAAGAATTTAAAAATAAACAGGGAAATGCTGGAGGTGTAGTACTCCCAAAGGCTCTGGAA
GAAGCTCTTGCTTACAAAGACCAAAGACAAGCAGCTCTTGGTAGTGAAGAAGATAAAGAA
ACAGATGTGCAAAAAGACATGGAAGCACCGCCAGCTCCAGTGATCAGTACGGAGTATGAC
GTGGAAGAGGATGAACAGTCAGACGATGAAAACATTCCTGATCCACCGATGCCACCAGTA
ATTTCCAAACAAGAGTCCCAAGCTAGCAAATCCAATAAAAACAAAAGAAAGAAAAAGAAA
AAGAAGCTGGCTAAACAGAAACGCAATGAAGAGTCTAAGACAAAGAACAACGCACAAGAA
GAAAAGAGATCCAGTGACAAAGAAAATGAAAAAGAAGCAGATATTGAATACGTGCAAGAA
AACATACAGTTTCATGAAATGGAACCAATGTACCGTCAGTTCCATCGGATACTGGAAGCA
TTTAAAATTTCGGAGAAAAAGGAAGAGACGATCAAAGATGAGGGTATGGATGCTCCAAAA
CCAACAAAACATCAGGATAAAGTGCAAGACCAGTTCGCAGCGGATGATGAGGCAGCTGAG
AAAAACGCAGCCGACGAAAAGGAGCGCCTATCAAAACGCAAACTAAAAAAATTGTCGCGT
TTGTCAGTGGCCGAACTGAAGCAGCTAGTGGCTCGACCCGACGTCGTGGAAATGTACGAC
GTGACCGCGCGGGATCCCAAACTACTTGTCCAGCTAAAGGCACACAGGAACACTGTCCAA
GTACCCAGACATTGGTGTTACAAGAGGAAGTACTTGCAAGGAAAACGCGGTATAGAAAAA
CCTCCCTTCGATCTACCGGACTTTATAAAGAAGACAGGAATCATGGAAATGAGAGCATCG
CTGCAGGACAAAGAAGAGACTAAAACCCTTAAAGCGAAGATGAGGGAACGTTCTAGACCG
AAATTGGGCAAGATCGATATTGACTACCAGAAATTGCATGATGCCTTTTTCAAATGGCAA
ACAAAACCGCGTATGACAATCCACGGAGATCTGTACTACGAAGGCAAAGAGTTCGAGACT
CGTCTGCGCGAGAAGAAGCCCGGAGATCTGTCCGAGGAACTGAGAACTGCTCTCGGTATG
CCCGTCGGGCCCGGCTCACAGAAGGTACCACCGCCGTGGTTGATCGCGCAGCAGCGGTAC
GGGCCGCCGCCCTCGTACCCGAACCTCAAGATCCCCGGCCTCAACGCGCCCATACCCGAG
GGGTGCGCCTTCGGCTACCACGCCGGGGGGTGGGGCAAACCGCCCGTCGACGAAATGGGA
AAACCGCTCTACGGAGATGTCTTCGGACATCAGACGAGTGGACAAGATGACGGCGAAGAC
GTGGACATCGACAGGACAATGTGGGGCGAACTGGAGTCTGAATCAGAAGAAGAGTCGGAG
GAGGAGGAATCGGGCGAGGAGGGCGAGGCAGAGATGGGCGGGGTCGGCACTCCCGCGGAG
GGACTCGCCACGCCGCTCGGACTCAGCTCCGTGCCGCCCGGACTCGAGACTCCCGACAGC
ATTGAACTCAGGAAAAAGAAATTGGACTCCGATCTTGACGGAGGAGAGACTCCGGCTCTG
TACCAAGTACTGCCGGAGCGCCGCGTGGGGGTGACGTCAGGGATGATGGCGTCCACGCAC
GTGTACGACATTAACGCAACGAACCCCGTGAAGCGAGCGGGCGCGACCTCGACGGGTCAC
GGCCCGGCGGGCGGCGTGGAGGTCACGCTGGACCCCTCCGAGCTGGAGCTGGAGCCCGAG
GCGGTGGCGGCGCGCTACGAGCGCCATCTGCGCGACCAGCGACCCAACACCCACGAGGAC
CTCTCCGACATGCTCGCGGACCACGTGGCCAGGCAGAAGAACAAAAGGAAACGTCAACAG
AACACGGACTCAAAACATGCGAAGAAATACAAGGAGTTCAAGTTCTAGTGATTGTAGACT
TATCATTACATTTAGTATTAAGTATTATTGTGAATAAAGGGATGTGTACTATGCGTTTCA
AATAATATTTCAAAGTGACAAACGAAATTTGGGTTTTTCTCTCTCTTTTTAAATACAGAT
TTTGACAAATCAACCGAAAATAGAAAAAAAATATTTTTT
(2739 bp)

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