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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10229_c0_seq2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.47 TPM:1.47
ORF EntryO_BomoSK6928_3prime_partial:A_BomoSK_comp10229_c0_seq2
Sequence
(Nucleotide)
GTTTCGTTTTATTGACTGTAAAGTTTCTATTAGACTGAGGTTCATCGAACAATTTTACAT
CCCAGTACGGAATTTGATGTTGTGCTGGCGAAAGATGCTAGAAATTCCCTGGACAGAACA
TCGCACCAACGTGTCGATCCTCCAAGAACTCCAGATAAAGACGAGGCTTTCTACCATCTG
GCTACGTAAAGTTCTGAATTACTTTGGCCACATTGCCTGAAAAGATGACGGCAACTTGGA
GAAGCTAATGGTGACTGGCAAGATGGACGGAAGTAGACCATGAGAAAATCTCACTACCCA
ACATGAGTAGACTTCTGTAGACTATTCAGGCGGCTGGCTATGGTTCGTTCTGATGGAGAT
TTCGACTGACGAATGAAGGAAGCGAACGGGAGCATGGTTGGACCGTAGGATGCGTCTCGT
GTCGACGCTACTATACGCAACGCTGCTTCTGTGCACTCGGGTTTGCGCCTTCATACCCGG
TATTGACGGTCCCCTCTCACACCAAGAAGCACTTGAAGGTGGAAACACAACATTCCTCTG
CGACACAACCCCTGACTCCTCGGGAGATGAGTTCATGATATTAGTCTGGTACAAAAACAA
CATTCCCATCTACAGCTTCGAGATCCCCGATCGGGAATGGGCGGACTCCACGTTCAACGC
GACAGGTCGGATGTCGGCGGACGTCCGCAGCCAACCGACAGCCATCACGGTGTCTGTACT
CACAGAAGATGACCAGGCCGTCTATCACTGCAGAGTAGACTTCAGATTGTCTCCAACGCG
CAACATCGGCGTTAACTTGACCGTTGTTGTACTGCCAAGTCCTCCGTTTTTCATGGACGA
GCTTGACAATAAAGTAGAGCGCACAGTCGGCACTTACCACGAAGGCGACACTCTGGTACT
GAAGTGTCTGGTGATTGGAGGTCGCCCTCCACCCCGATTGAGCTGGTATTCTGGTAGCAA
CTTGGTAGACGCATCTGATGCAGACAGTGACATTCCCTCGGTGAGGGAAAATGAGCTTTA
TCTGCCTTTGACACGGGCCAACGCGGGTTCGATATCCTGCAGAGCCAGTAACACGAATTT
AGCGCCACCTGTTGAGTCTAAGCTGGATATTGAACTATATTTGCCGGCGTACAACGTGTC
CATCCACTGGGTGTGGGGCACGGCGGACGGCGTGCTGCGTGCGGGGCACCCCGTGTTGGC
CCAGTGCACCGCGCCCGGCTCCTACCCGCAGCCCGACCTGTCCTGGTGGCTGGACCAGAA
GCACTTGACGCGACATAGCAATCAGAGTTGGGTGAGCTCATCCAGCACGGCGATATCGTA
TCTCGAGCTACATCCGTCGGTGGGCGACGACGGCGCTACGTTAGCGTGCGTAGCCACCAA
CCACGCGATGGCTCCCAGTCGAAACTCCAAGGCTGATGTCATCACCCTTAACGTCACATA
TAGTCCATTACTAGAGGTAGTTAGAGTGGGTGACGGTAAACTGAATGAGGTGGTCGAATT
GGATCCTCTGCACTTGGAATGCGAGGTCAAAGCAAATCCGCCGGCGTACAAATTTATATG
GTATTTTAATGATAGTGAAATAAAATCGAATAGCGTGTGGGGGGAGAATGTTACCAGCCA
AGTATTGTACGTTGAGGAAGCGACCAGGGAACACGCCGGCCGATATTCGTGTGTCGCCGT
CAACTCTATCGGCGAAACTAGAGCCGAAAGCTTCACTGTGACCGTGCTTTACCCACCGGA
ATGCTCCCACCACGGGATAAGATTAGTTAAAGAAGCTTTAAGCTGCAACGTCAAGGCCTT
ACCGGCGCCAGACACGTACCTGTGGCATATAGAGCCTTCGGATTCGCTGGAGCAGCGCCT
CACGACCGGCTCTCGTCTTCTACCTCTCGACCAGATCACGGGCTCCCTTGATAGAAGCTT
GAAGGCTAGTTGCGAAGCGAGCAACGGTATAGCCTCGCAGGAACGTGCCTGTGAGAGGAC
CTTCTCCTTCGAGCAGCTGAGGCCGCGACAGCCTCAGCAGTGCGATCTCGCGTTTGAACA
CGGCGAGTTCCACATTAGATGTGTCCCAGTCGAAAACGCAACGTATTACGAAGTGTCTGT
ATGGAAACTATCGACGAGTAACAGCTCTTTAGTCCTCGAGAAACGTGCCCCGATGGGCTT
TGGGTCCAGTCAGGCTCTGTCTTCTACGGGAAGCACGTGGCTCGTCAGAGCTGGGCTAGG
GAAGCTCGGTGCTGGCGACGAAGCGGGGGCCTTGGCCTGCAATAGATACGGATGCTCAAA
GGCTTTGCTGTTGAGGCCTAGTGAAACCCTGCTCAAAGCTGCCTCGCCCCCTTGGTGGAA
TGTGCTATTATCGAAGGAGGTGTGCATCCCACTGGTGGCTGCGGTTCTCCTTGTGTTGTT
TGCTGCGTCCTCGGCGGCGGCGCTGCGGGCGGCACGGCGGGCGC
(2444 bp)

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