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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10229_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.72 TPM:3.74
ORF EntryO_BomoSK6927_3prime_partial:A_BomoSK_comp10229_c0_seq1
Sequence
(Nucleotide)
ATTGACTCTCGTTAGGGGCGCACGTGCCTATCGCGCGCTTTTGACTTTCCGGAACACGTG
ACGATCAAAGTTAAAAGTTTATTTATTTCTTTATTTAAAACGTATTTACGTGTTTTATTG
TTTTTAGTGAGCATTCCAATGTGATTGTGAAGTTCAACTCGGGAATGTGTGTTTGGTGAT
TTTTTTATCTCTTATTTTGGGAAAGCATTAAGATTGTACTAAAAAAGAAAGATAATTTTC
TTTAACGCTTGTAATCAACCGGTACCTCCGAATCTGGAATTAGCAGGTTCTTTAAAATCT
CACTACCCAACATGAGTAGACTTCTGTAGACTATTCAGGCGGCTGGCTATGGTTCGTTCT
GATGGAGATTTCGACTGACGAATGAAGGAAGCGAACGGGAGCATGGTTGGACCGTAGGAT
GCGTCTCGTGTCGACGCTACTATACGCAACGCTGCTTCTGTGCACTCGGGTTTGCGCCTT
CATACCCGGTATTGACGGTCCCCTCTCACACCAAGAAGCACTTGAAGGTGGAAACACAAC
ATTCCTCTGCGACACAACCCCTGACTCCTCGGGAGATGAGTTCATGATATTAGTCTGGTA
CAAAAACAACATTCCCATCTACAGCTTCGAGATCCCCGATCGGGAATGGGCGGACTCCAC
GTTCAACGCGACAGGTCGGATGTCGGCGGACGTCCGCAGCCAACCGACAGCCATCACGGT
GTCTGTACTCACAGAAGATGACCAGGCCGTCTATCACTGCAGAGTAGACTTCAGATTGTC
TCCAACGCGCAACATCGGCGTTAACTTGACCGTTGTTGTACTGCCAAGTCCTCCGTTTTT
CATGGACGAGCTTGACAATAAAGTAGAGCGCACAGTCGGCACTTACCACGAAGGCGACAC
TCTGGTACTGAAGTGTCTGGTGATTGGAGGTCGCCCTCCACCCCGATTGAGCTGGTATTC
TGGTAGCAACTTGGTAGACGCATCTGATGCAGACAGTGACATTCCCTCGGTGAGGGAAAA
TGAGCTTTATCTGCCTTTGACACGGGCCAACGCGGGTTCGATATCCTGCAGAGCCAGTAA
CACGAATTTAGCGCCACCTGTTGAGTCTAAGCTGGATATTGAACTATATTTGCCGGCGTA
CAACGTGTCCATCCACTGGGTGTGGGGCACGGCGGACGGCGTGCTGCGTGCGGGGCACCC
CGTGTTGGCCCAGTGCACCGCGCCCGGCTCCTACCCGCAGCCCGACCTGTCCTGGTGGCT
GGACCAGAAGCACTTGACGCGACATAGCAATCAGAGTTGGGTGAGCTCATCCAGCACGGC
GATATCGTATCTCGAGCTACATCCGTCGGTGGGCGACGACGGCGCTACGTTAGCGTGCGT
AGCCACCAACCACGCGATGGCTCCCAGTCGAAACTCCAAGGCTGATGTCATCACCCTTAA
CGTCACATATAGTCCATTACTAGAGGTAGTTAGAGTGGGTGACGGTAAACTGAATGAGGT
GGTCGAATTGGATCCTCTGCACTTGGAATGCGAGGTCAAAGCAAATCCGCCGGCGTACAA
ATTTATATGGTATTTTAATGATAGTGAAATAAAATCGAATAGCGTGTGGGGGGAGAATGT
TACCAGCCAAGTATTGTACGTTGAGGAAGCGACCAGGGAACACGCCGGCCGATATTCGTG
TGTCGCCGTCAACTCTATCGGCGAAACTAGAGCCGAAAGCTTCACTGTGACCGTGCTTTA
CCCACCGGAATGCTCCCACCACGGGATAAGATTAGTTAAAGAAGCTTTAAGCTGCAACGT
CAAGGCCTTACCGGCGCCAGACACGTACCTGTGGCATATAGAGCCTTCGGATTCGCTGGA
GCAGCGCCTCACGACCGGCTCTCGTCTTCTACCTCTCGACCAGATCACGGGCTCCCTTGA
TAGAAGCTTGAAGGCTAGTTGCGAAGCGAGCAACGGTATAGCCTCGCAGGAACGTGCCTG
TGAGAGGACCTTCTCCTTCGAGCAGCTGAGGCCGCGACAGCCTCAGCAGTGCGATCTCGC
GTTTGAACACGGCGAGTTCCACATTAGATGTGTCCCAGTCGAAAACGCAACGTATTACGA
AGTGTCTGTATGGAAACTATCGACGAGTAACAGCTCTTTAGTCCTCGAGAAACGTGCCCC
GATGGGCTTTGGGTCCAGTCAGGCTCTGTCTTCTACGGGAAGCACGTGGCTCGTCAGAGC
TGGGCTAGGGAAGCTCGGTGCTGGCGACGAAGCGGGGGCCTTGGCCTGCAATAGATACGG
ATGCTCAAAGGCTTTGCTGTTGAGGCCTAGTGAAACCCTGCTCAAAGCTGCCTCGCCCCC
TTGGTGGAATGTGCTATTATCGAAGGAGGTGTGCATCCCACTGGTGGCTGCGGTTCTCCT
TGTGTTGTTTGCTGCGTCCTCGGCGGCGGCGCTGCGGGCGGCACGGCGGGCGC
(2453 bp)

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