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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10209_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_SPF27_[Papilio_polytes]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:12.29 TPM:12.36
ORF EntryO_BomoSK6894_complete:A_BomoSK_comp10209_c0_seq3
Sequence
(Nucleotide)
ATATAAAGTGATAAATCACAGTACCCATTCGTAGTAAAGGGAGTTATAAATTTTGTAGAA
AATGGCAGGAGAAGTTGTCGTAGATGCATTACCATATATAGACCAAGGATATGACGATCC
TGGAGTAAGAGAAGCTGCATTGGCCATGGTGGAAGAAGAGTGCAGACGCTATAGACCCAC
AAAGAACTATCTTGAAAATGCAGGACCAGAACCAAGTTCTGCATTTGAAACTCCTGCTTT
ACAACGAGAGATGGAAAGAGTGCAACAGAGATTGCCGATGGAACCATTGTCTATGAAGAG
GTATGAACTTCCACCCCCTCCAGTCGGAAGAATGAGTGAACCAAGTGCCTGGGCCGAGTC
AGTTGACAACTCTCATGCACAGCTGTCACACCAAGCTATCAGAGTTCTCAATTTAGAGTT
GCAGTTAGAGTACGGTTCAGAAGCATGGAGATCATACCTCAATACACTTCAAGCATTAGT
CACAAGAGCTCAAAACGAACACAACCAGTTACGTAAACAAATAGGCTCTGTGAACTGGGA
ACGTAAACGCGTACAAACAGCAAGCGGTGCGAGGTTGCGGGCATTGAGGCGACGGTGGGC
GCAACTTGTCTCGGACAATTATAGACTTGAAAGAGCCCTACTTCACTTACAACAGGCAAA
GGGAGAAGTACCAGTAGAAGAAGGAGAAGAAGCCGATTTGGACATTGTAAAGTTACCTGA
AAAACTCAATTCGGAAACAGAGAAGGAAGTGCAAAAGAAAATTGAAGATATGTTTGCGGA
TTAAAAGGAATTTTAGAACTTTGGAGTAGTGTTTTGGCCATTGATAGGTACAACAAGTGG
AGCCGCCCTTATGGCTTTTATGTTGCAAGAATCAACTGTTACATGAATCGCAAGTAAATC
GTTTTGGTATGGGAATATACAAAATCGATAGCATAACACATCTAATATAAAATATTGTGA
AAAAAACTGGTTACATTATGG
(981 bp)

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