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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10127_c0_seq3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0007419 P ventral cord development
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.18 TPM:7.23
ORF EntryO_BomoSK6827_complete:A_BomoSK_comp10127_c0_seq3
Sequence
(Nucleotide)
GCGGGTGCCCGCGTGCCGCCGGATCGCGTTGTAGATGGGCTTCGTCATGGCCGTCAGCCG
GGTCGGCGCGTGCGATATGTTGAAGCCCTGGATGTGCAACTCTAGTGGGAGGGATCTGAC
GCTAGGGTGGAAATTGAAGGTGGCATTCGCGTTGCAGCCGAGCCACTGGGCAACGTCGCG
GGCGTCGGCCAGCGGTAGCGACAGGGCCACTATACGGATCGGCTTCCCTGTCTGAGAGGC
GATGTACCTCATCCTAGAGCAGACCACCTCCACGACCGGCCCCTCCTCGCCGCCCAGCAG
CTGCAGCGCGTCCGCGATCAGCAGCGACACGCTCTGGACGCTCTTGCGTACTTTCCATCT
CCGGGAGAGTATGTCCCACTTATCGGCCGTCGTTATGATGATCTGGCCTTTGTTGAGCAG
CTTGTGGTCCGTAGCAGTCTCGCCGGTCAGCTGGACCACCTTAAGATTGAACTTGGTCCC
GAACTTGTGGTAGCAGTGCGCGAACACGATGTCCGCCAGCGCGTCCTTGGGCAGCAGGTA
CACGGCGCGCCCGCCCGCGTCCCGGGACAGCATCCGCAGCAGCGCCAGCTCCGCAACCAG
CGACTTGCCCGAGCCCGACGGCGCACCCACGAACACGTTGTCGTCAGAGTTGTACACTGC
GTTGAACACCTGCGTCTGCACCGGGTTGAACTGCGGGAAGGTGTCGTTGTACAGCTCCTC
GTACTTGGCATTCCGGAGTGCCGAGATGGGCAGCGGCTGCAGGTCCAGCAGCTCGGTCGG
CGGGAAGTTCTTCTCGGGCAGGATGAGGTGCCGGAACGACACCGGAAGCTGCGTCTCCGC
TGCTATCCATCTATCGGACACGACCCTCAGGAAGTACTGAGGAGGCAGGGGCTCGAAGAC
CGGCACGAACAGCTTCACCTGGTGCTCGTCCTTGCAGTACTTCTGCTTGAGCAGGAAATA
CTCGTGGTGGAGGATCACCTCAGAGTCCACGTCCTCCACCAGGATCCAGAACGCCTCCGA
CTGTCCGTGGATTTTCTCGTCCCAATGGAAGTCCGGCGTGATGGTGAGCTCGACCCTGAG
CGTCGACCTGGTGATGGGCTGGATGTGCGTCGCGAGCTCCAGCTTCGGGAACTGGTGCAC
GTACTTGTGCAGCATCTTGCCCAGCTTCGGAGCGCGGACCAGCTCGCCGATCTCGTTGGG
GCCCAGCTCGTACAGCTTCTCCCACGGGAAGTTCTTCTTCTCGAGTTTCTTTATGACCTC
TTCGGGTATCTTCTTAAACTGTCTCAACGGCGACATGGACTGCCACATCCTTCTGTCCAC
CATCTTGCACAGCGCCAGTGTTTTGTCCACCAGCTGCGCCCAGCCTCTGTACAGTACAAT
CTCGAAGATGGCCCTGAGCAGCCTGCAGGCGGACTGCGTGACGTACACCATGTCCGCCAT
CAGCGCGAACCCCTCGAGCTTCAGCTGCGAGATGTACGCCTGCAGCAGCACGTTGATCTT
CGCCGAGGACTCCTCTATGCTCTCCTTTATAGGGATCGGCACCCTCTCCATGAGCTTATG
CAGCTCCAGCTTCTCCTCCTCGCGGACGGCGATGTGCTTGAACTCGGCGGAGAGCGAGAA
CACGCGGAACAGCTCGATCTCGCCGAGCGTCGGCTTCAGCAGCTGGTTGTACGACTGCAT
CGTCTCGTACGTGCAGTAGAAGTGCGAGGCGATGCGGCCCAGCTCCGTCGGCTGGAAGTG
GCCGGACTTCTTCTCGTATTTGATCAGGCCGGCCTTGTCCAGTAGACTGGCGGCGGTGTG
CACCAGGTCGGCACGGTGCAGTTCCAGCAGATTGTCGTCCTGCATCTTCTCCGGGGAGAC
TCCGTACAGCGCCGGCTGCCTCAGCATGCGGATGTATAGATACGTGTAGCCCAGCCACGT
GACGGCGTCCCGGACGCTCTGCACCGAGCCCAGCACGATCTCCGCGTTCAGCATGTCCGG
CAACTTGCTCACCAGCTGCGACTCTATGGGCAGCTGCTGGTTCAGCAGCGACAGGTAGTA
CTGCAGCTCCGAGTGGTTCGTTATCAGGATGCCTTCTCCCTTGGTGTCGTACTGCGGTCT
CCCGGCGCGGCCTAGCATCTGCAGCACGTCGAGCGCGCCCAGCTCTGTCCAGCGGCCCTT
CTCGGGGCAGTACACCTGCGTGCCCTTCACGATGACGGTGTGCGCGGGCAGGTTCACGCC
CCACGCTAAGGTCGCCGTCGACACCAGCACCTGTATGTGCCTATCAGCGAACAGATCCTC
GACCAGCGTCCTGTCCACCCTGCTCATGCCGGCGTGATGTATGGCGAAGCTGTACGGCAG
CAGCTCCCGCAGCTCAGGGTTCTTGACCTGCTCGGCCTCAGTGCGCAGGACCTCCATACT
AGCCGACCCCTCTCTCAAAAAGTGTCCAAGCGTGTCCTTCTCGAGGCACATGTCGCGGAT
CGCGCGCGCCGTCTTCCCGGTCTCCTTGCGCGAGTGGACGAACACTAATATCTGGTTCTT
GCCTGCGTGCTCCATCACCTTCTCGTAGACGATGTCGTTCATCACCTGGAACCGCTTGAG
AGCCTTCTTCTCCGTCACGCCGATGTACTGCTGCTCGAGGGCCACCGGTCTGAAGGAGTT
GTCGAAGTAGAAGAGTCCCTTCTCGGGTCGTACGCGCAGGAAGGTGGCCACGTCCGTGTA
GTTAGGCAGCGTGGCGGATAGGCCCACGAGCCGCACCTCCTCCCGAGTCTGCTCGACCGT
CCGCAGGGTCCGCGCCACCAGCGCCTCCAGCACGGGCCCGCGCTCGTCGTGCAACAAGTG
GACCTCGTCTATGATTATAAGCCGGACCAGGTTCGTGAAGGAGCGCTCACCGCCCTTCCT
GGTGATGATGTCCCACTTCTCCGGAGTGCACACGATGAGCTGCGTGGCCTCGATCTGCTC
CCTCGTGAGCTGGTGGTCGCCGGTCAACTCGGAGACCTTCATGTTGTAAGCGGACAGACG
CTTGCTGAAGTTGCCCACCATTTCCTGCACGAGCGAGCGCATCGGCGCGACGTATATCAT
CTTGAAGTCGTTGACATTGACAGTGCCGTCGTCGTTGACGTGCTTGCCGACCTCGCGAAG
CACGCACAGCAGCGCCACGTTGGTCTTGCCGGCCCCGGTGGGCGCGCACACCAGCAGATT
CTCGTCCGACTCCAGCGCCGGCTTCGATATGCGGCTCTGTATTCTATTCAGGGTCTTGAA
TCCCTCGAACGCTGGCTGGACGTATTTGGGCAGCTTCTCGATCGGCACTAGTGTCTCGTT
TTCTTCAAACGGCTTCGGTTTCAGAGCCGGCACGTGGACTTCTTCGTAACCTTTCCGCTG
CTTCCTGAATGAACCCGGTGGCAGCTGGCACCTCTTGTTGGCCATGAAGTGCGATCCAGC
CGCGAACACCAGGTCCTCGAGCTGCACCACCTTCCTAGAACCCGCTACCTGCCCAGATGT
AGAGCTGCTCTCGGCTTCAGATTTGTGCCTCTTTCGAGGGGCCTCAGAGTGAGTATCCAT
TTTCTCATCATCTCCATTGCCGGTCTCCAATTGCGCGAGGATCTTCTGCAGGTGAGGCTG
CCGGGACATCTCCTCACGTATCGACACGCGCTCGCTCTCCGACTGGGAGGACGCCAGCTT
CGTGCAATACAGGATCATGAACCTGTACTTGTTCAATATCTTGACGAAGTCGAAGCAGTC
GTAACCGAGCAGCAGGACCAGCCTGTTCTCCAGGTCTCTGTCGTCGGCAGCCTCGGCGAG
CGCCTTCAGCACGTCCGTGGATTTCGCCTGAGACAGCATAGCGTCAGGAAAATGTCTGGA
CAGTCGTCTCTGCAGCCAGTAAGCATCTATATCCATCGGATGCAGAGACTGTGAGTGGCG
TTTGTTAATTTGCTCCTCGCTCAGATTAGTGTGAATGGCATTCCTCTTCCCCTCTGTATC
ACTGTCCTCTTCTCCGCTGGATTCTTTTTCTTTCTCATTCTCTGACCCTTCACCATCTTC
TTTATCTTCTTCTCTTACCTCCCCATATGCATCTTCATCATCTTCCTCAGAGGACTCTTC
AAACTGCACATTGATGCCGTATGTCTCGTCTATTTCGGTGTTGCTCTCTGTTGCCGTGGT
CATGTTGAAGTCTGTTATTTTCTTGCCTAAATTGACAAGTAAAGCAAATCTCTCGTCTGG
TATGGAACCGAGGAGCATCTCAATTTCCTTCTTCTTCTCTGGATCTTTCAATTTATCGTT
CTTTAGAACTAAGAGTACCTCATCACAAGCGCCGCATAATATATCCCTTGGCTGGTCTCC
GAGAGAGCTCTGCATGAACGCAAGCAGTAGTTCATAGGTATGTCTAGTGTGTTGGGCTCT
GGGACGGTATAGAACGCCTGGAGCATCATCAGCCCAAGCCACACGACTGGATTTTGATTT
AGAGAGTTCGTAGGAGGCTTCATCACGTTTTTGACGCTTAGCCTTTCTCTCCTCAGCTTT
ATCTGGTTTAGTGCGTTGAGCTCGATCACCCATCTTAGTTCCTGTGAGCTTTCCAGACAG
CGACAAAACTTCACCGGTCGCTTCATCTCGACCACGTCTCTCTATTAACCTTACATCAGC
TTGCAGTACAAGATTCGAGTTGGCCTTGTACTCATACTGCAGCTGTCTGGCAGCCGCGTC
AGCCATGCTTCACTATATACAAGAATGTAGCTTTACTCTTGTTATTTGACAAAAAATGCA
GGAAGGTATTTTAAATTCGAAATTACAATTTAAAATAACACAGTTTAAGGTTAGACCGCC
G
(4801 bp)

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