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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10114_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		putative_lectin_C-type_domain_containing_protein_[Danaus_plexippus]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0004528 F phosphodiesterase I activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0017108 F 5'-flap endonuclease activity
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0036297 P interstrand cross-link repair
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0070336 F flap-structured DNA binding
Transcript
Level		FPKM:4.09 TPM:4.12
ORF EntryO_BomoSK6787_complete:A_BomoSK_comp10114_c0_seq2
Sequence
(Nucleotide)
CTAAAGAAGTTTCACTTCAAAAAATCAAATCAGGATCGGTTTCGTTGAGACGATAAGGTG
ATTATTATGACGGGCGTGTGACAGACACAGTGATTGGCGTGTATAGTAGGCAGCGTCAGG
GGCGGTCGAGCCTGGCGCGGCGCCCGGAGTCTCCGCCGACGTAGCAGAAGGCCGTGCGGA
GCCCGCGCTGCTGGAGATAGTGCATCCACTGCAGCTGCTTCACGGACGGACGGTCTGAGT
CAGACTTCACCTCCATGAACGTTATTGTTTTCGTGTGTGCGTTCCACAGCGTGAGGTCGG
GGAAGCCGCTGTGCGCGTGCCCGTAGTTCGTGGCGAGTCGCTCGCACAGCGCCCCCACCC
GCCGCGGCCCCAGGCAACCCGCCACCATCTCTATCCTGTCCCACTCTATGCTCCTCGTTA
GTCCAGATAGTTCACCCTCGGGCCTCGAGTCCCACACGCGTCTCATGGCCTCCAACATAT
CCTCTGCGCTGCCCGCCGCTAGACTACTCAATCGCTCGTCGATCTCACTCTTTCTATTCG
TGTAGAAACTATCGCAGTACAAGTCCAATGGATACCTCTGATAGCGACTGAGGAATATAC
CTGGTGCGTGAGCAGGTTTCGAGTATATGATATCCCAGAACAGCAGAAAGAATATTGTCG
TGATTATTCTGCCTTCCCAGTGATCACCGTGGGTGTACGTTCCGTTGTTAATGTAATGCC
AGATACAGTAATCTTCAACCTCAATGGCTTGCCTTATCCCATCTATGCAAACCTCGTACT
TCAATTTGCCTTTATACCAGTTATCCATAGGATTTTTGTGTAAATGCTCAGCGCTCAAAT
CCTTTTCCAATTTGATATTTTCATTGGCGATTTCGTTGAGAATTATTCTTAGTTTGTTTC
CTACATTTGTTTTCTGCTTCGATATTTTGACAGCTTGAGGTCGCATCGCGTCTTTGGCGT
CGTCTGAAAGTTTGTTGGACTGAAGTCCTTCCAATAATAACTGGGCCGCTTCATCGTGCC
GTCCAAGATATTTCTGTAGTATTAAAGCTTTTTCGGTATACCAGCCAGCTTTCTTGTGTT
GCCTGAACGAGTCCTGCGCTATCAGCACACTGAGTATTTCAACGGCGAAGTTCGAAGACA
CGTCACTTTTATTACGCTTCAGCGACTGGATCCCTTCGCCTAATATTTTCACAAATATAT
ATGGCGGCGTATATCGACGCAACCACTCTGGTAGTGAAGTGTATCTAATCATGTCTTCCT
TGTCAATTTTCTTGTACATTTCATACACCGTTTCTACTAAAATACATTTGACTTTATCGT
CCGTCTCGATTATATACTTTTCGTATATATAATGAGCGTCTAGATACTTCTCAAACTCTT
TTCGATTTTTGAAAACAACACTCGCATCATCAATATCCCTGTTTTCGATAATTGGAAATG
TCTCACGATTAATCTTCTCATACAGTAATGTAAGTTCCAGCCTCTTCTCTCTTATAATTG
AGTAGCCCATTCCTAAGTATGTCAATAGATACAGCTCATACAGTGTACTTCTTGCTTTTT
CAGTTAACTTGTAGCACGACCCTAATTTTTTTTTAAATATTTCCAAGAGTCTGGTCTTGT
TGTTGGTAGGGTTTTCTTTCGCTTGTATAAAGAACTTGCTGATGGAACTTTGGTTGCTGT
AATTCTCTAATAATTTTATTGCACTTTGTTTGGACTGAACCTTTATATTTAATTCCTTGC
ATATTTGTTTCAATTCATCAGCTTTCAATTTAGAAGTTATCTCATGAAAATTTAATTTGC
ATGTATCATCAGAATTAACATTTTCAAGGAAACCATTTTTCACTAGATCACTGATCATTT
CTTGTACTATTTGTTTTTGAATTTTATTAGACCTATCATTGCTGATATTTTCAAGATCAT
CCCAGCGGTAAATGGTGGCCTGCCTCCAATACAATCTACATATAACTCTGACACCAGGCT
TTTTCACATGAAGACATCTACTTAAAAGAGTCTGAGAACATTCATCTAGTAGGTTCTTCA
AATTCTCATTATTCAAAAAATTATAGATGATGTTCAATAGAAATATAGTTTTATCATCCA
TTCCATCACTTGCAGCTTTGAAAACATGATCAATTGAGTTATCGTTTTCTAAGCATCCAA
ATGAATCTCGAGCTAAATTCTTTTTGACTGGACTTCTTTTTTTTAAAACAGCTCGCTTTT
TGTTTGGTGAGTAAAATTTATCTTTTGATCCAGATCCTTGAGAACCGAATGATTTTGGCG
ATTTCCGTGGGGTTGTCGGGCTTATTTCAGATTTAATGGAATCAATTAAAGTTTCAGTTT
TGCAATTTTCCCTTTCAGGGCTTGGGAATCTTGAAGAGGTCTCCGCTTTTGGACATATGT
TTACTATGGAATTAGTATATTCATTTTTTAGTGTCTTTACGGGGGGTCCGTTTGCGAGAC
TCAAACTAAATCTTTTTTTACTTCCTGCGGAATTCTGGTTCATGCTACTGAAACTTTTAG
AGGGCAATTTCGATTTAAAATATTTATCAATACTTGTTTGATGGCTCATGGTGCTCCTAT
GAGCTCTACAAAAGAATATGTAAGTACATTTGTCATCATATGTATTAATTTCCAACTGTT
TCCATTATTTTTTCCACAATTTCAATTTTATTCACAGGTTTTATATGTAATACATATAAT
AATTAAGTTATAGCTTGCCCGGTATAGTACTATAATATTTCCATTTCTTTATTTTCTCG
(2759 bp)

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