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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10113_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_tRNA-splicing_endonuclease_subunit_Sen34_[Papilio_xuthus]
Ontology
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:5.09 TPM:5.12
ORF EntryO_BomoSK6785_complete:A_BomoSK_comp10113_c0_seq1
Sequence
(Nucleotide)
TACCCACGCTACGCCTTCCGGTACACAGTCGCCACTCGAGAACTTATCGGCTTCATCAGC
CATCTCTATATTTCTATACATTTCTTGTGGAAGTTGTACTAAAGTGTGGTCTGGATCTAA
ATCTTGTATTCTTTTTATTTCTTCTTCTAACATTGCATCTTTATCAATATTTGCATCAGA
CATCCCTTTATTTATGAGGTTTTTCTTTTTCCCAGCCACAATGATATCAATCTTTTGTGA
TAATTGTTCTATTTTGCGTTTCTTTAATGCTGATGCTTGTTGTTCAAGTACTTTTTTTAA
AAATTCTTCCATTAATTCTTTATCCTTTTCTGTTGGTTCATATTTACAAAATTCAGCTGG
CATTTCATGAAGTTCACATATCCTCTTTTCAACCAATAATGCTGTTTCTTCAGAAGATAA
TGCAATCGGAAGCCCCAAGAAATCATTTTGCCTTGGAAATGAAGGTACTGAGCCAACGAA
AGCAGAGCATATTCGATGCTGAGTACGTAAAATATACCAATGTTCCGAGTTCCACAAATA
ACCAATTCCTTTTTCAACGTATATCGGTATCATAATTGTTGATTAACTTATTTGATGACT
ATCTTTT
(607 bp)

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