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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10025_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_putative_zinc_finger_protein_840_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.06 TPM:2.07
ORF EntryO_BomoSK6674_5prime_partial:A_BomoSK_comp10025_c0_seq1
Sequence
(Nucleotide)
GCATATATATTTAAAGTCGACATATCCATATCAAATTTTCCATAAAGAACATAACAAATT
GTACTCAGTTCTGATGTGTAATTGATACATTTGCAACAATTTTTAAGATAAGCATTTTTC
AATCATCTGATTGTAGTCCAAGAGGTCGACAAGATCTATACAATGATAATTAGGAACGGG
CATGTAACGCCATCTGTTGGCAAACGTTCGCACACTAACCACTGTGCGGCCGGGGCGTGC
ACGTAACGCCATCTATTGGTTAATATTCCCACACTAATCACTGCAGCTGATTATACGCCA
TAGCACCGGCTGGAAATGTGGTGAGGGGACCTATGATCAACAGTAAAGTACTCGGCTACA
GGAGGCGACGTAGCGGCTGCATTTCTTCATCATCGAGCAGCAAAAGGTACCATATCTGCG
CACATTCTAATGACCTGCTTCGCGACTTCCAAATATAAATGACGCAGTATATTCTGCAAG
GGGGCTCCGATTTGAGCCCCGTGAGCTCATCTACACGTTAAGGCGAAGCTGAGATAGCCT
CTCAAGACTATTAGCATAGGTAGGAAAAAATATAACTGAAAGGGTGTTATTTGTTGATTC
CCATAGGCTCTATGCTTTGGGTATATGCCTAAATAACGTCACCCAGTATAATCTTCCGCC
ATACGTCACTGGCCACAGTCCTCGCAAAATTCTGAAAGTCGCAGAAGAATATCTCCAAGT
GCAAGGGCATTAGTACCACATCCCGTCCCATAGGAGTATATTTTACATCCAGGCATCCTC
CTCCAACATCCAAAGTGAATCTGGCCAGACTCTGACCTCCTCAACTATTCGCACTTACAT
CAACACAGGCTCACGATGTCAGAATACCATTTTAACTAATTAATAATACGGGACCTTTTA
AATCACAGAATGAGATGTCTGCGTATGAATCTCTAGTTTCCTTTGAGTCGAATACGCCGT
TTTACAAAACTTACAAACGTGGATTCCTCCGTGGCGTCTCCTCATGTGCACGTAAGTCTT
GTTCTGAGAATAAAACGTGTGATTGCACAATTGACAAGCGTAAGGCCTGACCCCCATATG
CTTTCTAATGTGCGCTACGAGCTGACTCCTGGACCTTAACACTTTAAAACAAAGTTCACA
GCGCTCCTTAGATTTCGAACTATGCAGTTTCATGTGGCACCTCAAATCGTATTCGGTGTA
AAACTGCTTTTCGCACATGTCGCAAGCGTATGGCTTTACTTGTAAATGAACTTTATTGAC
GTGAGCCGTGAGCGCATTCTTGTTTGCGCATTCCTTCTCGCAGAAACCGCACGTCTTTAC
ATACCGGCGTCTGATGAGGCGCAACTTTAGCGCGTGCCTCTCCATGTGGGCTCTGTAATG
CTTGACCGATACGAAGACCTTCCCGCAGAGCACGCAGTTAGTTTCGGAGTGCGCCCTGGT
GTGTGACTTCAACTTCTTCAAGCTAACGTGCCTTTCACATATCTCGCATTTAATCAACGG
CTTAACGTTAGTCCGATGCGCGCTCTTCACGTGCTCGATAAAGTTGAATTTCGTTTTGAA
GACTTGGAGACAGGCGCCACACTGAACGTTTCTGTTGGCGTGCCTCACGATGTGCCTCTT
CAAGAAGTAATCCGATATAAAATTCTTGTAGCATAGCGGACACGTGTAGTTTTCGGCCGC
GGGTTTGGGCTTGCGCAACACCGGCTTTTTGAACGTTAGGAACTCGCTGACTCTGCTCAT
AGGGTCCAGGTCTTCGTAGCCGTTCACCAGATCGTGTTTCGGAAGAGGCGCTTCGATGTC
TTCGCGGCAATTATCTCGCTCGTCTTCCGAGTCCGTTTTGTCATCACCAGTTTCATCCTG
CTGTCTGAATTCATCTTCAAGAACGTCCACTTTCAATTCCTTTTCATCAGATGGCTCATC
CTGAGTTGAAAATAAGCTTAGACTGTTCTGTATCGGCATTATTGTTGACAGTGAAATTTC
AGCGAAAACATTTCCCTTTGAAGCGTCTACCACGTTCAGACCGTTTGTTAATGAGTTTAT
GCAAATCTCGAGCCTATTTCTGGTAAAATAAAACTGATTCACGAATACGTATGCTATGAT
GGCATGGTCAAGGCATTTTTCGCATATTTTTGTTCCCATGTTACGACTCGCGTTAATCTC
CGGCAACATGGAACTGACAATTTTGTACAAACTCCTATCACCAGATAACTCGGGACAGCC
TCCGTGCAAGCATAGCATGCTCTCCATATCAAACAGCCTGTCTTTTTTCTTTAGGCAAAT
AGAGCAGAACTTGTCGGTTTTACGATCGATCAAATCTTGTAGTAATTCTTGAAATTTGTG
CTTCTCTATGTGTTGTAGATAAACATTATATTCTTTTGTGTTATAATTACATATTTTACA
TGAAAAACTGTGATCTGGAATTTCAACTTCTTCTCTTGCGTGAGTTATAAAATGCTTTTT
GACTTGATGACGTTTTGGATAAGCTTTACCGCATATCCTACAGTGGTACCACATACTTTT
GGGATGTAATTTTTCATGGTTCAACAACGATTCAACATTTGGTAGCACTTCACAACATTT
CAAACATTCATAATCTTGTAGTTTCTCATCTTTTGTTAGTGATTCTGTCGATGTGTTTTT
AAGATTGATAATTGGTTCAGCGTAATCCATAACATTTTTATGTTCGACATATATTTTATT
GTAATTGGGATTCAATTTTTGTCGGCCCCGTTTCTTAGGGCGTTCCAATGGATCTATCTT
TTCAAATTTCTCATAAATATCTTCAAAACAGTTACGTAATGCTCTCTCTGCTTGTTCACA
TTG
(2823 bp)

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