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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10006_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_chaoptin_[Bombyx_mori]
Ontology
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016028 C rhabdomere
GO:0032528 P microvillus organization
GO:0035996 C rhabdomere microvillus
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0046658 C anchored component of plasma membrane
GO:0050896 P response to stimulus
Transcript
Level		FPKM:7.62 TPM:7.67
ORF EntryO_BomoSK6656_complete:A_BomoSK_comp10006_c0_seq1
Sequence
(Nucleotide)
AACGGTACTCGTGGTTAGCGGCTTGCCAGTCGACGCCAGCGCACTCTTCGGAGGTCCCTG
CCCTCCTCGCTGTCGTTTCTTGCTACATACCTCACGCGTTCACGCTCCTTGTACATAAAT
AACTAGTTTAAATCGAAGAACATATTTCTAAATTTAAAAATATATATTTTTCAATTTATT
TGTGTCCATTCGTTCGACTTCAGAGGTGTGTGAGGAAACTTTTAATGTGAACCATTACTG
TACGCGGTGGTGTGTAAGGAAACTTTTATCAATACAGCTTTTGCCAGCTTTCAACGTTTT
GAGAGTTAAATGTGATTTGTGAAATGTTGCGAATTATGGAGATTCTTCGTTTTAGTACCG
GCAAGGTGATTTTTTATCGTGTTTGAAGCGATAAAGTGAATTTTTATGAGTTATTGAACG
TGCGTCAGTTTGTGTGTACTTAAATTTTTGGCAGTAACTTTCAAGATCATGTTGCTGTTG
CTACTTCTATGTTTACTTCCGTACATCGCCACCCAACAACAATGGGTGCCTTGTTCAGAG
TTGAACGACGACTTACGCTACCCCTGTCGGTGTCGAGTGCAAGTTGACAGAGCCCTCCAG
TTGAGAATCTTGATGAATTGTGACCGAGTGGTCTTTGCTGGAGACTTCCCGACTTTGCCA
TATGGCGCTCCTATTATTTCCTTCAGTCAACGTTGGGCTGGACAACAGACGCTGCCGATG
CAGATATTCTCCACGTACGGGCTGCCTTTACGCGAGCTAGATTTCTCTCACAACAGTCTA
CGACGCTTGCCAGATCGTCTCCTAGCTGCCGTCCGGGGAAACCTGACCAAGTTGGCATTA
GCTGATAATCTACTCGGTGACAACTTGAATCCTATATTCTCGACTGCAGAACTCCACAAT
TTGCCCGCTTTAGAAGAATTGGATCTTAGCGGCAATAGCATACGAGGGATCGAAGAGGGC
TTGTTAATCGGATGTGATGTTCTACAGGTACTCCGCCTTGATCGTAACAACATAAACTTC
ATTCCGTCCTCTTCGCTGAACGGGCCACAATCATTGAGAGTCCTTTCGCTTCAGGAAAAT
AAAATAGCTTTGTTGCGTCAAGCATCGTTTGTTTCACAAAAGTCATTAGAAGAGATTAAC
TTACATGGAAACATGATATCGACTATTGAAGGAGGGGCATTTCTAGGCTTAAAAGACCTG
CAAATTCTAGATCTAGGCCGCAACAGACTGTCTAAGTTCAATAGTGACGTGTTTCAAGGC
GCTGAAAACTTGGAGAAGCTGGACTTGTCTGAGAACTTTATAAACGATTTCCCCACCGTG
GCCATCAAAACGTTTGGCGGCTTAAGTCATTTGAATTTGTCTAGTAATATGATTTCCAAC
ATCGACAATAGCCACCTAAATTCGCTGTCATCGTTACAAGTTTTGGACTTAAGCCGGAAT
AATTTGGTTAAGCTCACCCCGGGAACATTTGTAGGACTGACTGAATTGAGTTACTTGGAC
ATCGGAGTGAACTCTTTACGAACTGTCGAAGATAATGCCTTCGATGGACTGACAAGTCTT
AAAACTCTTCTCTTGCGAGACAACAACATTCTGCTGATCCCTGCTACTGCACTGTCACGT
TTGCCAAATCTAGTTTCAGTGCATCTAGGATTTAACAGAGTAACGGCTCTATCAAACGAT
ATACTTAGATCGGTTTCAGATAGAGTGACTTCTTTAGTTTTGTCAAGAAATGTTATACGA
GAACTACCGACGGCAGCATTTGATCATTTCAAAATGTTAAGGCACTTGGATTTGTCAGGA
AATTTACTGAATACGATTGCTGCTGAAGTATTCGATGGATTGGAACAATCGCTACAGTTT
CTGTCTTTAAGCCAAAACAGAATTCTAGGATTCACTGGACAACAACTAAAGTTTGTGAGC
CTTTGGTTTCTAGATATTTCTGGCAATCAGATATCAAATGTACCTGTCGAGGCTTTTGAG
TCTATACCGAGTTTGACACATTTAAATATGAGCCGTAATCAGCATATTAACGTTTTACCT
CAAAACTTATTCCAACACAATCAAGCATTATTGACTATTGATTTAAGCTATAATGGATTA
AAAGCTCTCCCCGTGAATTTATTCTCCAAAAATTTTAACTTACAGCAAATACATTTATCA
AATAATCTTCTGCAAGAAATTTCTGAGAACACCTTTAAGAATCTTCGAAATTTGACACAT
CTAGATCTGTCATATAATAATATTGTCAATTTAAGAACACCATCGTTTGTCAATGTGATG
TCTATACAATATTTGTCACTCAAAGGTAATCAGTTAAGCGCTTTTAAGGGAGAATTTTTC
AACACAGGAACAAGTCTAGAAGTAATCGATCTTTCAGACAATCAGCTTAGCTACTTGTTT
CCCTCTGCCTTCAAAATACACCCTCGTTTGCGAGAAATCAAACTTGCAAACAATAAGTTC
AACTTTTTCCCGTCGGAACTTATAAGTACTTTGCAGTATTTAGAATTAGTTGATTTATCT
GGAAACGCTTTGAAAAATGTCGATGAGCTTGATTTTGCTCGCCTTCCAAAACTGAGGACA
ATTTTACTAGCAAGAAATGAATTGGAAACAGTTAGCGAAATGGCTTTCCATAACTCGTCG
CAAATACAACAATTAGATTTGTCTCAGAATAAAATCGACCGCTTGGGAGATCGACTTTTT
GAAGGACTAATAAGATTAGAAACTTTAAACTTAGCAGGGAATATGCTTGCTGAACTACCT
GATAGTATTTTTGAAAGGAATCGTTTACATATGCTCGAAAATATAAATCTAAGTGGAAAT
TTGTTCGAACATCCACCCCTGAAAGCTTTACAGAAGCAATACTTCTTTGTTTCTGCTGTA
GATTTGTCACACAACAAAATAGTTGACATACCAGCCGAAGACAGTGTTTTGGTAAACATA
AAGAAATTAGATTTGTCTTTTAATCCTTTATCACAAAAATCGATCGATAGTGTGCTCAAC
GAACCGAAAACTGTTCGCGAACTAAATTTGGCTGGCACGGGAATTCAAACTCTGGGACAA
CTTGAGACTCCATTTTTGTGCAGTTTAAATTTGTCTTTTAATAACGTTACAAATTTGTCT
GATAAAACGTTTTCAAGAACTACACTATTGGAATCTTTGGATCTGTCTCACAATCAAATA
TCAGATGTATCGGGTTCTCTGGCGGTGTCATGGCCTAAACTGAAGAATTTACAGAGACTA
AACATTTCTAATAACCCCATAGTCATGATCATGGACGGAAATTTTGAGGGTCTAACGTCG
CTGCGTGTGTTAAATATGAATAATCTAGACAAATGCACAAGAATTGAAAAAAATGCCTTT
AGATCTCTTCCAAACCTCATTGAATTAAGGGCTTTTGGCTATCCAAGACTTGGCTATTTT
GATGTTCAAGGCACTTTGCAATATTTATTTGCACTAGAAAAATTAGATGTTGAACTGAAA
GACACAAATATTGGGCCAGATCAGCTACACTCTACGTTACATCCTCGTCTCGAAGAATTG
GGCATTAGAGGATCTCGATTAAAAACAGTGTCTTCGGGTGTGTTAGCTGGTTTAAAAGCT
CCAGCTATAGTAGTTAGACTCCGTAATACTTCTGTATCAACATTACCACCTGCTTTGCTA
TTTCCTCTACCGAGGTCATCGCAAATAACAATTGATGTTGGCGGCAGTCAATTAGAGACT
TTACAACCTCAGTTGCTGGTGGCACTCGACGATCGACGTGCAGATCTATCGATGTTGGGT
TTGGATACCAATCCTATCAGATGTGACTGCAATGCTCGGGCTTTGAGACGATGGCTACCA
AATGTTGGAATTGATAATATTCGCTGTCAGTCACCAGACTATTTATCTGGATATTTACTT
GTTGAAATAGGAGACGATGAACTAACTTGTGACTCAAAACGCCGAACAACAGCCACATCA
ACTTCAAGTGTTTCAACAACATCTCCACCACGTTTAGTTCACCGCACATCTTCTGAACCA
GATATTATATGGTCAGTAGCTCCATCTCACGATAGACCAAAGATATCCGGAGAACCGAAA
GGCGCTCCTGTTATCGGTGTTGCAACGGCGTCGAACGATGACAATCTCATAATTGGAATA
GTTAGTGGTGTCGTTGCTTTTATAGCTATTTTAATAGTAGCCATTTGTATTATAAGATTA
AAGATGACTACAACATCATACAGAGGTGGACCACTAGCTAATAGCCCAACAGGCGGTGCG
CCAGCAGTATGGGGTCCACCTTGGCCCGGTTATACCGGCACAATGCCACCAGCCTCTCTA
TCAACAGCAACATTGCCTCATAAGGTTCAACCAGGACCGGGTTCTGTTAGGTACATTGCG
CCTCCACCTCCTGGACCAGCACCGTATTTCATAAGCTTGCCTCCTCATGAAGATAAAATC
TATCGATAACGAATTTAATATACTGTGTTAGCAATTAGACTGTGTAAATATCAGAATGGT
TTAAAGAATTATTGGTTTTTTAATTTTTACATTGCAAAGCTAGGTTTTTGTCTATCTAGT
CGCCAGTGAAAAATTGAGATTCCAATAAATAAAACTGAGTATGTACTTAATATGCAATGG
GTTGTGGTTACGTTCTTGTATAACTGTGACATCTTATAATTTATTTGTAACTTTCTTAGA
ATTTCTTTATAAATGATAAAGTAAGCATAAG
(4711 bp)

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