SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp78_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		mitochondrial_tRNA-specific_2-thiouridylase_1_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002143 P tRNA wobble position uridine thiolation
GO:0003723 F RNA binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016783 F sulfurtransferase activity
GO:0070903 P mitochondrial tRNA thio-modification
Transcript
Level		FPKM:0.99 TPM:1.07
ORF EntryO_BomoOtmSK12_internal:A_BomoOtmSK_comp78_c0_seq1
Sequence
(Nucleotide)
GTTTGGAGTGAATCCCGTTTGATATTCTTGTAGTAACACAGTGAATACTTCATTCCAGTA
TTCTTTGATGAAATATACTCGGTGTAACGGAATATTTAGCTTACGACAGACAAACGTAGC
GTCTGCAAAATCGTTTTCATCAGAACAATAACCCGCTTCGTAATTGCTGTCCCAGTTTCT
CATGAATACGCCTTCCACCTGATACCCAGCTCGTTTAAGTAAAAGCGCTGCAACTGCACT
ATCAACTCCTCCAGAAACTCCCAATGCTACTTTATGGAACATTTTTATTAAGCGACAAAA
ATTCGAATTTCT
(312 bp)

- SilkBase 1999-2023 -