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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4968_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007423 P sensory organ development
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0008593 P regulation of Notch signaling pathway
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0045179 C apical cortex
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:4.05 TPM:4.36
ORF EntryO_BomoOtmSK1418_3prime_partial:A_BomoOtmSK_comp4968_c0_seq1
Sequence
(Nucleotide)
GTCCCCCACCGCAACCCCCCCGCCCGCACCCGCCGCGCCCGCGCCGCCCGTCGGGCTCGT
CGTCGTGTATGCGCCGCTGAATATCTTAGTTAAAACAGCAGGGTTAAATGTCCACCTATT
TCCGCTTGGATAAGTTACAACAATGTCGTGGTCCTCATCTATGCCAACCACAGTACCGGT
GGTACCGAGACACTCAAACATACCATCTGTCCAACCACCATGACCATGTTGTAGTGACTG
TACTATTTCAAGATCAAGGTCTACATTCACCTGATCACCAACTTGTAGTCCATGTGGGCC
TGTTCTTCCAGGGCCAAGTTCGCCTAGCAATGGCAAGTGTTCCTTGTACACATTCTGACC
TTTCACATCATTAACGGCCTTCAGGTCAGCCATTCCCTCAAAGCCTACCCTGTAGAGATT
TTTGGCACCATTATCCCACACAACATATGCAGCAGATCGTGGACTAGCTGCTGACCAATC
TTGGATTTCATTGACTTTTCCACGCCTACAATTTCCACCATCTTGATCTTCCCACTGCCA
ATCCACCCCTCTTACGACTCTGGCTCCTGGAAAGATACCCCTGACAGCCTGTTTTTTACT
TTTTCTTCGTGGTTCAACCAAACATCGTTGTGCCCCTGGTGCACTAATTCTATAAAATCT
ATGACGTAAATTATGTTTATCTCCATGATAGCAGACAGAGCATAGATCATAATTGCTGCA
TTCAGCACATTTCCAACGTATACCAAATATGGGTTGTTGCCTGCAAGTATCACACATAGT
TCCTTCATGTTTCACACCAGTAGGGGCACTATCCAGAATCCGCAGATCATAGGCACCTGA
ACATCTATAATTTGCAGCTGTTCCATTATCCCAAACGACTACTACTTCTTCTGGAGACTC
AAAATTCCTTACAGTGCCAAGATGGCCCTCTCCTCCATCCTGTTTTCCCCACTTCCAATC
TGGACCTCGAATCACACGAGCTCCTACTCCTTCCATCATAAAACGGGTTGGTCTAGATGA
TGTTGATGAAACAGAGATATTACTCTCCATTTTGACTTTCTCAGAGGTATATTATAAAAT
AATTATATTTCTTTTAATAAACCTAAAAAGTTGGAAATTAGAAACTGAGAATCAAAACTT
TGTTTGACACCAAA
(1154 bp)

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