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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4901_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RNF25_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051059 F NF-kappaB binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:3.70 TPM:3.98
ORF EntryO_BomoOtmSK1360_5prime_partial:A_BomoOtmSK_comp4901_c0_seq1
Sequence
(Nucleotide)
CCTCCCCCCGCGCCCGCCCCGGGCTGCGCGTCGCGCGACGACCCGGCCACATTGTTCCGG
GATGCGTTGTCAGTAGTGGGTGTGGTTGTGATGGTCAGCAGGGGGGGCCCATTGTCGCCC
ATACCGACGACCCCGCCCTTAGCAACTTGCACAGCTAACAGTTCGGCCATCTTCATTTGG
AGTTCTTTTAGTTCAGCTGTCAAGCGGAACGGTGGTGCCGACAGGGAGCTCTTTGGTGGG
GGAGCCTCCTTTAAAGTGTCCACGTCACAGGATACCGTGCAACGACACACCGGGCAGGTT
TGCTGGTAAGGTGGCACTTGCATCTGTTGCCAAGTAGGTAGTTTCTCAAGTTCCTCGTGA
TAATATTTCTTGCCAGCGATGAAATGGTTTGCAAGGCAATGATTGTGGAAGTAATGGTAG
CATTGCGTCTTTATAAACAAATCACCATCGACAAAATCATATAGGCATATGACACACTGG
CCACGAGGAAGATTGCTCTTAGTCAGATGATCACGTACGATTCCAATAAGTTCAAACACT
ATTGGTTGTCCCAAATTATTTTTCAATTTGTCTTGAATATGTGTGTTGATAGTGTCTAAA
ATCATATCATCTAGACCTCTAGGGTTTTTGAGCGCTACTTCTGGGCTGGTGTCTGGATAG
CCAGAAGACAACCCCACCTCCAGAGTCACACATACATATTGCTGATCGATATTATCCCCC
GTCAACGGATGGATGATCGTTTCAATTATGTATTTTGGGACATCTCCAACGCGTTTTACT
ACCACATCTTTCAGTAGAATTGCTTCTAATGCTTGCACCTCGTCCGTGATTCTTTCATCG
CCGGAGGACGACATTTTAGTGATTTAAAACTGTTCTACAAATTATTATTGATGCATTCAG
CTCAGACTTCAGGCAAGCGCAATGCAGCTGACGCAGCTTAACATATGGTATAATATGTAC
TTTTATTTATGTTTCCAGCTTCATGCAAAGCTCAGGCTGCTCGCATTGATTTCAGCGAGG
GGACTGAGGGGTGGGG
(1036 bp)

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