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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4874_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		plexin-B_[Bombyx_mori]
Ontology
GO:0002116 C semaphorin receptor complex
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0030154 P cell differentiation
GO:0030334 P regulation of cell migration
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071678 P olfactory bulb axon guidance
GO:0097374 P sensory neuron axon guidance
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
Transcript
Level		FPKM:0.50 TPM:0.54
ORF EntryO_BomoOtmSK1337_5prime_partial:A_BomoOtmSK_comp4874_c0_seq1
Sequence
(Nucleotide)
GGAGAATACAGGCATGATGTACCTGCAATTTCTAGTCGAAATTTGATGACACTAGGACTT
GCACAGCTGACATTCTCCAAACAGAGTATGCTGCAAATTGATGTAAAATACAGAGATAAT
TTCCTAGTGCATTATGTGTATGGTTTTAATGCCAGTGACTATGCCTATTTTTTATTAATC
CAAAAACATTCTCACCTCGCTGGTAATGAAGAACTAGGCTATGTATCTCGTTTAGCCCGT
ACATGTGTCAATGATGACAATTATAACAGTTACACAGAAGTTACCTTGGAGTGTCATGTA
AGAGAAGAAAATATTAACGGTAAGAGTGAAATTGTCATGTAAGAGAAGAAAATATTAACG
GTAAGAGTGAAATTGTCAATTATAATCTTGTTCAAGATGCTAAAATTGCAAAAGCTGGAA
CTAATTTAGCAATGCAACTTGGAATTGAGACAGGGGCCCCAATTCTAGTGGCATTGTTTA
GCCCATCCAAAAGTATATCAAATGAACCCATGACAAAGTCATCTATGTGTGTTTTTTCTT
TACAAGAAATAGAAATTAAGTTTAATGAGAATGTTCACATGTGTTTCAATGGTAGTACGA
AGGCACGTAATATGGGCTATATATCAGGGATGATATCTGATGGCAAATGTCCAAGCGTTG
GTTCCACAGGAAATATTTTGAATTTTTGTGAGGTGGGTCTAAAAATAAGTGGTCTTTACC
CAATTAGAAGCACATCAATTATCAATTGGAATGATACATTAATTACTTCAGTTGCTGTGT
CAGTTACTGGATTGCATACAGTAGCATTCTTGGGTACTAGCAATGGTGTTCTAAAAAAAG
TATTGATTGATGCAGATAAAGCCTTAGAATATTCTAGTGAGAAATTGCTTCCAAATGAAA
AAATATTACCTGACACTACATTTTCACCATATCAGAAAACTCTATATCTGCTGGGCTCCC
ATAACATTGTACAAATACCAACAGAAAAATGTGCAGAACATGGAAATTGTTCTGCATGTC
TTGAATCTAATGATCCTCATTGTGGATGGTGCTCCCTAGAAAAAAGGTGTACGATACAAA
GCATGTGTCAGAAAGGCACATTAAGTGCACCAAGGTGGTTATCTCAGTATATTGGTCAAC
AGTGCATTGATTTTGAACAAATTTTACCTGATAGAATATCTGTGAATGAAGTGACAACAG
TACAGCTAGCTATAAAAACTTTGCCAGAACTACCTTTTGGGGCCAAATATAAGTGTGTGT
TTGGCAACGCTCCCCCGATTGATGCAGCAGTTACATCTAATGGGTTAGCTTGTCCCACAC
CAGATGCAAAACATAGACCTAAAATTCCAAGTAATCAAGATCATGTCAATGTGCCTCTGT
CAGTTCATTCATCAGAAACAAATAAAGATTTTGTTTCGCGGAACTTTGCTTTCTATGATT
GTTCCAGACACTTAACATGTCATTCTTGTATTACGAGCGAGTGGGCATGTAATTGGTGTA
TTTATGATAATGTGTGCACACATGATACCTCAGCTTGTCAAAGAACCATCATTAGTGGTG
AAAAGAATCCAACCAAACTGCTTAATCATGGTATTGGACATTGTCCTAGAATAAGGCAGT
ACAAAAATCCAATTCTTTTGCCCTACAATGTTCCTAAAGAATTAGAACTGGAAGTTGAAA
ATCTGCCTCATCTGCAACCTGGTCACATAGGTTTCCAGTGTGTTGTTACAATTGAGCAAG
CAAACATGATATTGCCTGCACGAATAGAATCAAATCATTACATTGTTTGTGATAAAACCA
CTTACTCATATGAAGAAGATGTAGGTGAATATAATGTAAGTGTAAAGGTTGTTTGGAATC
ATAATCATTACATAGACACAGTTATGATAACGTTATATAAATGTGAAATATTAGGATCAC
ACAGAGAACATGCTGATTGTTCACTTTGTATCACTCGGAATTCTATATATCAATGTACTT
GGTGTGGGAATTCATGTTCATATAGTGAATCTTGTTTAGAAACTCCTGTAACAGAATGCC
CAAAACCTAGAATTGATATGATAAAACCATTAAGTGGACCCATAGAAGGTGGCACAACTG
TAACTATAGAAGGAAGTAATCTTGGATTAAGAGTTGAAGAAGTCACAGGAAAAGTTCGGA
TTGGTGATGTTTTATGTCAAATTGTAGATTTTGAAGTATCAGTTAGCATAACTTGTCGAA
CAGGACCATCCAATCATTCTACAGTTGCCCCTGTGATAGTTGAGAATGACTCGGGATATA
CTGAATCATCTGTTATGTATAGTTATGAAAATATAAAGTTGCAAGCAATTTATCCCACAT
TAGGGCCAGTTTCAGGTGGGACTCAATTAGCTATTGGAGGAGAACATCTTAATATTGGAT
CTTCTGTCAAGGCATTTTTAGATGATCTACCATGCTCTGTTAATAAAACACAAACGTCCA
ATAGCAGACTGATATGTATAACACCTAAAGCAAACTTTCCACACATTATTCACACGCTGA
CAGTCGTTATAGACAATGCTAACAGAACTTTAAAAGGTGACCTTTTTAACTATACTGCTG
ATCCTACCATAATGGAAATAAAGCCTTTAAAAAGTTTTGTATCTGGTGGTAGAATGATTA
CTGTGCATGGTACTAATTTACATACTATTCAGAAACCTTTAATGAAATTGTATTATGCGA
ATGAAGAAATCCCAGTTAATCATACAGAATGTAAAGTTTTGAGCTCAAATCAAATGGAAT
GTCCAAGCCCAGCAATAAATACAAAGTATGTAGAGATTCTGCAAGCAACAAAATCACAAA
CCAGCACTCCTCAAATAGCGATGAAAGTAAGTTTTGTGATGGATCATGTGGAAACAATGC
AAGATCTTAAAAAATATTTCAATCCTCCACGAACGCATATGGTATTTGTTGAAGATCCAC
ATGTGTATCAGTTTCCTAATAGAATAAAATCATATAAAGGTGACCCACTAGTAATAGAAG
GCGAAAATCTGATAAGAGCCAGTGATGAAACCGATGTTGTTGTAACTATCGGCACACAAC
CATGTAATGTGACCAGCTTAACAATGCAACAGCTCCTATGCACACCTCCCGAAGTACAAC
CATCCAATACAGACGAAAACGGAATGCAAACCACAGAGAAAAGTTTACCATTAGTAGTTG
TCAAAGTTGGAAAGAACTTGCGTTTTCCAATAGGCTATCTACATTACGAGCTTTTGAGGA
ATTACAATTTTCCCCCAGAAGCTATCGCAAGCATTGCGGCTGGAACTTTTTTCTTGGTAC
TAATATTTATGATTGTGTTGGTGATGTACAGACGCCGAAGTACGAAAGCCGAGAGGGAAT
ATAAAAGAATACAAATTCAAATGGATACGTTGGAAAGCAATGTACGATTAGAATGCAAGT
TAGCATTTGCAGAACTGCAGACCGATATGTCAGATTTGGCAGCTGATTTAGAACACTCAG
GTATTCCAACATTAGACCATGTTAATTATGTGATGAAAGTATTTTTTCCGGGAGTCTCCG
ATCATCCCATATTGAATGTTCAAAGACAGTTCATTAATGCTCCACGGACCAATTATGATG
CAGCTATGTTTCAATTCGAGCAACTATTAAATAATAAGTGTTTTTTGCTGTCATTTATAG
ACACATTGGAAGCGCAGAAATCTTTTAACATAAGAGACAAAGTAAATGTTGCTTCGCTTT
TAATGATTATATTAATGGGTAAAATGGAATATGCTACAGACATCCTCAAATCTTTGTTGT
TACGGCTCATTGATAAATCAGTTTGCAGTAAACATCCACAACTTATGTTAAGAAGAACGG
AAAGTGTTGTAGAAAAAATGTTGACGAATTGGATGGCTTTATGTATGTATTACTACTTAA
AAGATTATGCTGGATCTTCATTATTTTTGTTATTTAAAGCTATAAAACATCAAATCGAAA
AGGGAGTCGTCGATGCTATAACACACGAAGCTCGTTACTCTTTATCAGAAGAGAAGCTAT
TAAAAGAGCAGATTGACTATCAGACTGTAACCCTACACATTGTTCAAGACGAATTTGATG
AAAAAGTTCAGTGTAAAGTATTAGACTGTGACAGTATATCACAAGTAAAATCGAAGATAC
TAGATGCTCTCTTCAAAAATACTCCATTTTCACTCAGACCTGCTGTCCATGAAGTTGATC
TCGAGTGGCGTCATGGAAGAGGTGGACATGTTACGCTTCAAGACGAGGATGTCACTACTA
AAACATTAAATGGATGGCGAAAATTAAATACATTAGCCCATTACGGCGTTAAGGAATCCG
CCATAATGTCGTTAATATCACGACAAAACGATAGTTTCAACACACCTTATAAAATACCAT
GTAAAAATTGTACAGGAATATACTGTTCGAATTCACATATACGCGTATACAATAGCGACA
TTACTGATCAAAACGTGCATTATTATCATTTGGTAAAACCGATCGAATATCAACATATTG
TCAACAAATCATCTGAGCACAGCCACAAAGCCATTCCAGAAATATTTCTCACAAGGCTGC
TATCTACTAAAGGCACAGTACATAAATTTGTGGACGATTTCTTTGGCACCATACTCACAG
TAAACGAAGTACTGCCGCCCGCAGTGAAATGGCTATTTGATCTATTTGATGATGCAGCAA
GAGCTCATGGTATTGTCAATCCAGAAGTCGTCCATGCTTGGAAGTCTAACAGTTTGCCAC
TAAGATTTTGGGTGAATCTCATTAAAAATCCTGATTTCATTTTTGATATAAATAAAACCG
CCACTGTAGACTCCTCTCTGTCCGTGATTGCGCAAACTTTTATGGATGCATGTTCATTAT
CAGAACATAGACTTTGTAAAGATTCGCCGTCAAACAAATTACTCTTTGCAAAAGACTTAC
CCACTTATAGAGATATGGTCATAAGGTTTTATCAAGCAGTTTCTCAATTACCACAAGTTA
CAGACCAAGAAATAAGCACGTCTATGCAACAACTCTCTGTGGAACAATTAAACGAGTTTG
ATACTCTATCAGCCTTAAAAGAGTTATATATTTATGTCAGTAAATATAGAGAACAAATTA
TGTTAGGATTAGAAAATAAAACACACTTAGCTCGTAAATTAGAAAATACAGCGTGCACCA
TGGAAGGTGATCCTGCGTCCATGTGCTGACTATATGGCAGTATCGATTTAATTGCATTTA
CATAATTTATTTCTATGAAATCTATTTTAAGAAAAAGCTTTAATTTATTCTGAAAATACT
CAGATTCAAAATCATTAGTATTTATAAAAGACTGTAATCTAAT
(5323 bp)

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