SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4870_c0_seq2
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		histone-lysine_N-methyltransferase_SETD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
Transcript
Level		FPKM:2.81 TPM:3.03
ORF EntryO_BomoOtmSK1327_3prime_partial:A_BomoOtmSK_comp4870_c0_seq2
Sequence
(Nucleotide)
GTGCTGCGGGTGTCTCCCTCCAAATGTGAGTGGTGTCCGTGCTGCGGGTGTCTCCAGTCT
CCCCACCACACGGCGCCGGGCGTGCTGCTCGCGGTGTACCCGTACCCGTACCCCTGTTGG
TAGTAAGGATCATATGGTACAGCAGGAGCCGGGGTATAGGACACGTCGGGGGCGTGACTC
GGCGCTGTGTAAGCGGGCTCAGCACTATCCGTCGTACTGCGCGCGTACCTCTCTCTTTCT
CTTTCTCTTTCTCTATACCTGTCTCTGTCCTTGTCTCTTTCTCTATCTCTATCTTTATCT
CGGTCTCTCTCGCTCCTACTACGGTGCCGATGTCTATACTCACGTTCATCATCAGACCAC
CGAGTATTACTATCACTCTGTTCCACATCTTTGTAGCGGGGATATGGTAAATCCTTTTCG
TTAATTTTTGTATCTTCTAATCGCTTTGTGAGCATGGGATCCAATGGTTTTTGAATTCTC
ACTTCTTCTAGTACCGGTGGCTTAGGAATTATAGTTGACAGCTGTGGTTTCTTTTCCATT
GTCTTATTTTCAAAGAGCTCTTGACATTTTTTACCAAATGCATCATGGAAGACTTCTAGT
ACCTGGCCCATAACAGATTTCCCATTATATTTTTCCACACACATCCTGGAGTACTTTACT
TCTTGAAAAACTATTCTAGCAAATCCTAAGTGACGATTTGTTACTGGATGATAAAATATA
GTTAATTCCTCAAATGGACCAACTTTATTCATCATGTCAGCTAAAAAGGCTTTATCGATA
TTATCATTCAAATTTCCTATCGTAATTTCAATTTGAGGAGGCGTTCCGACATAGTTTTTA
TCAATCTTGAACCTAGGTACAGGTAAATCAGCAGGTTCCAATCTGTTCCATATTCTGGAT
AGCTGAGACCTTGGATCTCTACTTTGAACTGGTGGATATGTAGGGTCACCAGGAACAAAA
CCATCATAACGATACAATTTTGTTGCTCCTTTTATAAGGAATGGATCCATAAGTAATTTA
TAGTTTTTAGGTGCTTTGTGAAGCACTACATTGTGACCAGGTGTTCTATGCTCCATTCCT
CCATTCATTTTTGCTGGATTTGATAATGTTTATAGATGATATTTCATTAATTTCGCTTCA
AGAAATACGAAAACCATTTTTAATAGTTTTACAATAACTCGACTATCGAAA
(1191 bp)

- SilkBase 1999-2023 -