SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4864_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101740740_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043220 C Schmidt-Lanterman incisure
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:1.15 TPM:1.24
ORF EntryO_BomoOtmSK1320_complete:A_BomoOtmSK_comp4864_c0_seq2
Sequence
(Nucleotide)
GGTGGTTTCAGTACTTACATTTGAAAGTTTCTGAGCTTTTACTATTCGTTTCGTACTTTA
ATTGGTCACGGACGACCGATAAGAGTTTGTCATTGATAGCAAAAACCACTTAATAAGTTA
TCATATTTTCTGAAGCCATGTTGAATTAAATTAATTCAGTAGGTACTTATTTTTATTCAT
CGTCGTTTAGAAGATCTGTGCATGATTTAGCTTTGGTAGATTGCGCTGTTTTGACTCGTC
GACATATCCTGAGCTCTATAGATCCGGACCTGACTGCTTTAAATAGTGCCAACGCTTCTA
CATGAGCCAGTTCATGACACGCCTGACCGTTGACCGCCAACACCTCATCTCCTGCTTTTA
GTCGTCCATCGTCGACTGCTTGGCCCTGTGGAAGGATGCTCTTAATGAAGATGCCGAGTG
GACCTCGCGGCGAGTCGCGTCCTCCCACGATCGTAAAACCGAGCGGTTTCTTCCCGTGAC
CTTTCTCAAATGTTATCGTGTGATACGTGTGCGTGGGCGCTCTCGGTCTCCGGGGTAGCG
TGCAAAAATTCGTTGCGTTTTGTGTATTTTCAATTTCACTGTCATTTTTTTCTTTAACAC
GCTCCGAAGCACTGTCCGTTGTGTCCACGTTTGCAATGTCGACAGCGCAACTGAGGGCGA
GCCCGTCCTTGTTGGCCCCGGCATAGCTGACCACTTGTCGACGCAGCAGTTTGTTGTTCA
TACTACTGTAAGTCGCGTTCTGTCCCTTTAGGAAGTGGGAGTGCGCGTTGGCCGCACTGT
CGGCCACCTCGTCCGCCACTGATAGCGCGCTGCGATTACACGCGGACTCATCCTGCGAAC
GTCGACCAGTTATTTTGACGTCATATTTATCAATACGTTTTTCCTTTCCTAATATTATTG
CGTTTTCGTAATCAACGGAGCTTTCGCGCATCAGGATTGCGCTTCTATGTGACGAATCGC
GCTGTCTTTGTTCTGTCGATAGTTTCTCGCGTTGTCTGCATATCACGATATCAATTTCGG
AAGTTCCTGATTTCAAGGCTTCTTTAGCTTCTGACATAGTAAGATCTCGAAGTCTTCTGC
CGTTCACATTCAGTAGTTCGTCCCCTATACGCAGAGTGCCTTCTTTTTCAGCTAATCCTC
CAGGAACTACATGTGCAACTAAATATCCGATATGACCCTCATCCGTGAGCTTGGTTTTGG
CTATAAAAATTCCTAATTCATCTGTTGGATTCCTTCGAACTATTTTGACAACTTTAAATT
CATTTTTGTCTGGTTTACTACCTCTAGTTGGTTTTCTACACGGTGGTATTGGAGGGATAC
CAGCGTCTCCTAACGTCGCATCCCTTTGTCGCATTTTTTGTTTTTCAGTCAGTTGGAGGT
ATTGAGGTTCATCGTATTCATTTTGTTTGGTTTTTGGCATTCGCCTCAGAATTTCCTTGC
GATCAAGTGAAAGTGCTCTTTGGGAATGTCGCGGCCGTGGTCTTGGACCGTCCCTCCGCT
CTCGGCTCATTCTACCCGATATTCTAGGCTTTGGATAGTTTTGATCACCGGACACACTTC
TCCCGTGACACGGTAATAGTGCATTAGCTTGTGAAGCTGAGCTCTCACACCGAGACGATA
TCCGATCGCTATCAAATATCGATGACGTAGCTGATTCGTTGACTAGAATACCCGAGTCGG
CGTCTTCGCAGTCTTGTATTAAAACGTTCTCATCGTCACACGATATTTGATACGCGTCGT
CGTGAAAGACGGAATGACTTTTTTGGAAATCATCCAATCCCGGTAAAGCCCCATATGAAA
AGCTACGTAATTTTGCCTTGACTCCTCCTCTTTTTTTTCGACTTTTACTGACAGCATTAG
TTGATTTGGTTGCGTTTTCAATATTTCCAGTGTCTTCTTCAGCTTCGCCTCCCGGTTTGT
ATAGCTTGGAGAAAAATTTGTTCGTAGAAGACTTTAAGTATCTATCAGACATTGCTCGTA
TTTTTGCCGATAGACATGAACTAGGACCAATAGAATCTTTACCATCTTTAGTTTTTAATT
TATCAGTCTTTTTGTATTGAGATTTCATTGATATCGGAGCTTCATCAAACGGTTCATATT
CGTCATTAAAGATTTGGTCACTAGATTTTGATAATTTTGCGCCGGCTTTAGGTATAGCGT
GGTATCGGTCACATTCTGAACCGGAGCTGTAGCATCTTGTACCTCTATTGATAAATGACT
TTCCCTCCCTCCACTGACTTTCTACAGGACTAGTTACACTTTTGGCAAAAAATACTTCAT
CGTCGTAATTTGGCATTTTCACCCAAGGGTTTTGGTTCTCGAATTCAAGGTGGGCGTCAG
AAAAATTGTTACTGTACCGACAACTAGTTACATCATCAATGTGGCCGAAGCCGCTACAGT
CACTTTCTGAAGTAGATGCTGCATCGTCGCCATGCCTTAAAGGACCGTTGGATTTGAAAC
AAGATAGTTTGGTGTTCTTTACTTTGTCGAGTAGTGGGTTGCGTCTTTCTCGAAATACCA
TGTATTCCTTCTCGAGAGAACCGCCGCGATTTTTACGCGATGTATTATAGTTCTCCTGCG
GTGAAGTGGGGCCGTTTTGTAAAGATATGCGGCGGGAGACCGGCGTTTCACTGCCGTGAT
TACAACGGTGAGGAGATTTCTCAACTATTATTATTTGATCGTTGAGGTTATAGAAGTTGG
TTTCAACCGAACTGCCGCTACTTTTTCTGTTCGGGTAGCGTACCGGCGATATATGGGTGG
ATCTGTTTTCGGCGTCCGGAGACACGGCGAGCAGCCGCGGCGGCTCGCCTTTCTTAAACC
ACCGCATTTTATCTGCCCAGTTCAATCCATTCTGAGGTTACTCCGACAAACAATTAGTAC
ACCGGCACAACGTAAACTATGGTAACAAAAACAGAATTGATGGTCTGCGAAACGTCCAGG
GGTATTCCGCTGAGAAATTCACGGAATACTATTATTGTGAAGCACCACGTGATGTAAATG
TGTATTTTTTATTAAACTATATTAAGTTTCACTCCACTTACAGTCACAAGTGTGTGACGA
AGAGAATAACTTAGTTTCGCGAGAGCACATGAAACAGAG
(3099 bp)

- SilkBase 1999-2023 -