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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4851_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		ubiquitin-protein_ligase_E3C_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:3.37 TPM:3.63
ORF EntryO_BomoOtmSK1298_3prime_partial:A_BomoOtmSK_comp4851_c0_seq1
Sequence
(Nucleotide)
CTGAAATTACAAAACACAAAATTACCAAAATGTCTAATTCACTGGCATTATATATTTGCC
TGTTAGATTGCTGAATGAAAATATTTGGTCTTTGTGATTGCTATGTATGTGCGATTCATC
ACCAATAAACAAAATATATTTACTGACTGACCTGCAAACTAAGAATTTATGAAAATTTCT
TAACATCATGTATTCATTCGAGGGAGACTTTAGGCGAAAACCCCAACAAAATTTAGCAGG
TGCAAGCGCGGCACGAAAGACCGATAGAGACTCTTTGATTCAACAAACACAGTTACAAAG
ACAAAAACGAGAGGAACACCGAAAACGTTTAAACAGTGTTATAAAAATTCAAGCATATTT
TAGAAGCTACTTAACCAGAAAAAAATGTAAACAAGTAGAAAGGGACCAATTTGATGATAT
GTTTCCTAGAATTAATGTAGAAGATCAAACAACAATCTCAGCACTGTTAGCAAAAATATT
TTTCTTCTATGATGACAAAGCTGATGTTTCTAGATTGGTATCAATATCACAATTGTTGTT
AAAACAATGGAAAAAGGTCTTCCACAACAGTGGCTCTAGTATACAGATAAGAAGATTACT
AGCATTACATTTGCGACTATTGAAGTATAACACAGAGGTGCCTTTAGCAGTTCCACTCAG
AATGTTTGAAGTATTCACATCCACTAGTACAGTAGAAGCAGCAATGAACTGTGATGAGGC
ACTGAGATTTGTTGCCAATACATTCTTGTATTTAATTAAAAGAGGCTATTTCATGGATCT
GTGTAAATTAATATGTGAAAAGACCCCACCAATGTATGGTCCATCACCAAACCCACCCAC
CCCATTAAGCGGAGCACTTTTAGAGTTAATTCAGCGCCCTCTGTCACTGATCCTGCGAGT
GAACATTCCTCAGTATGAAGATACAGTAACAACAGAGTTTACTGCGGCATTTTTGTGCAA
TCCGTATCCAGAACCAGTAGAAATGTTTATATTACCATCTCTAGCACAGGATACCACAAA
GAAACTATCATTCTTAGCATTAATAAAGTGTTTACAAGACGACAACAAATATCATAGTAA
AAAGATTATAAACGATTCTTGGTTATTGCATTCGGTTTTGGTTTTAGAGCCAAAGCAATT
TATAAGTGAAATAAAAAATATTGACAATACAAGATTGCCAAGCAATAGAATAGTAATAGA
ATACCTTAAGGTAATAGCTAGATTGACTGAGAATGTGTGCAACAAACAAATCACCTACGA
ATTTGAAGACTCACTGTACAGTCAAGAAACTGCAGCGGACAAAGATGATGAAAGTGACAG
CGAAACCGAACCGAATCCCACCTCTATTCGTGAACAGATGCTGCTGACGCGGTGTATTGA
ATTATTGAATGATCCAGAAAGATGCATTATGGTCACCATATCTCAAATAACAGATAATGA
TTTAAGTGAAGAATTTTTAGAGTACATGTCTGAGATCTGTCACAATTTGCTTTTGAGTCA
TCGTATGGCTTTGCATAAGTACAGGTTATTGTATACGCTAGCATTTAAACCGATATTCTT
ACGAGGTCTATGGCGCTGGTTGAGTAATATGAACCACGCTTCCTCGTTCGGTGGTTCGTC
CACGTCTCTCCTGTCTGCGTTGTCCCGCGGTATGGGTGCCGAAACTTCTGTGATAGGTGT
TCATAGACTACTGGCACCTTTGGCTGTCTTCTGCGCCCTGTTCTCGCTATTAATCGGAAC
CTTACACGATACGGAGTTCTGCAAAGATATGGATGATGATGAGAAAATGAGCGTGCTGCA
CACCGGCGGTGGGGGTGGCAGGATTCACGCATTTGAGTTCTCGGAACTTGGCGGTCTATG
CAGAACGTTACGCCAAGTCTGTCTCGGTCTCATAGAACTGGCCTACCCTGAGTCGAGGCT
CACTGCCTGTGGACTGTACAAAGATGCTGTTGGTTACACTGATGTCGAAATGTCTGGCAA
GAATAGGACGCCAGCGTGGTCTCATCTATTTAAAGTGTGCACGCACCTCTTGCGCGCGCT
GTACGTGCGCGACTCGCGGCTGCAGTTCTGCGGCAGCGCGGCGTGGCCGGTGGAGGGCTC
CATCCCCGAGGGGGGCGGGG
(2120 bp)

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