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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4766_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		geranylgeranyl_pyrophosphate_synthase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.38 TPM:3.64
ORF EntryO_BomoOtmSK1223_5prime_partial:A_BomoOtmSK_comp4766_c0_seq1
Sequence
(Nucleotide)
AAGAGGTCCTACCACCAGTAATTTTGCAAAGATGTCCCTTAAATCAAATAACCTTTCACT
TCTCGATATAATTAAGTTTCTGTTTTATAACACTAGCAAAAGTTTCGCTAAAATTTAAGG
AACAAATTCAACTACCCTCACTATTTGTATTTGGAATAATTTATATTTATAATAAATTAA
GCTCATCTTTAGTTGCGCTCAAACGTAGTTCATTTGATCGTTAGCGTCGTCGCCTTCCTG
TCTCCAGGTGAGCAGATCGTCCAGCAGCGCCTCCAGCTGTGGGTTGCCGCCTAGACGGGA
CACCTCCTCCCTGGCGCGCGCGTCCAGATCGTTCAGGATCCCCCTCGTGTACCGGAAGCT
GCCCAACTTCTCCAACAACGTGATGCAGTAACGTTTCACTTCAACGTCCCGTGTCCTTTG
GCGGAGGATATGAAGGACTTGTTTGTCTTCCTCCTGACTCCTGATGGCGTGTATGATGGG
GAAGCTGAACTTCCCCTCCGTGAGGTCCTCGCAGTAACTCTTGTTCTCCGTGTACTCCCT
CATCGACAGGTTGCAGTAATCGTCGCGGATCTGGAAATACAGCCCCAACACGGCGGACAG
ATTGGTGAAGTCCGATTTGTTCTCGCTAAACAACTGCATCAGTCGTATCGCTAGCATGAA
CAGTCCGCCGGTTTTTTTGATGGTCATCTGTTTGTATTCGTCTTCAGAGGGACACTGGAA
GTTGTCCCGCCAGTAAATCTCCATGCCCTGACCTCGATGCAACTCCAGAAGTTGTTCGGT
GTATACAGTCGTTGCCAATGGATGGCCAAGCTCCAAAGTCTTCTCGAGGGCTATGATCAT
AGCATAGTTCGCAGCGTTGATGGTGCTCGCGACACCATAGATGGAGTGGGCTACCGGTAT
TCCGCGCCGTAAGATGCTGTTGTCTTGAATATCGTCGATCAATAAACTGGCATTGTGTAG
CATTTGTACAATATCACCGACTAGTCTCAGCTTCTCTTCAGATATCTTGAGCCAGTAGTT
GAATGCGGAAGCTAGCTTCGTTCTTATCTGTTTCCCTGGTACTTGCTGAATGTATGTGTA
AGGCATGAGAATTTTCTCATCTTGATTTTTATCACCACTTCTTGTGATAGCTTGCGACAT
TGTTGTAGATTTATTGATGAAAATATATAACACTAAAAAATGATATTCAGTGTATTGATT
TTCCGCTTCAAGATATTT
(1218 bp)

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