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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4751_c0_seq2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		intraflagellar_transport_protein_140_homolog_[Bombyx_mori]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:0.82 TPM:0.89
ORF EntryO_BomoOtmSK1202_5prime_partial:A_BomoOtmSK_comp4751_c0_seq2
Sequence
(Nucleotide)
CTTTGCTGTGGCACAGCACAAGGAACAATTAAAGGTGTCAGTTGGGGTTCTGAAGGATTA
ATGAACCCACTGTTACATGTAAACTGTATAACCAGTGCATATATTTTACGGGAACAACCT
GTTTGTTGGGGCTACTCTCCCAATATATCAATGGTACAGAAATCTGCTAATGAGATATTT
ATAAATCACATAAATGAAAACACAACAATAATAAAGAGCAATGTAACCATAAGGGCTTTT
GCATTCAGAGACCAATATATTGCCATAGGAGATGGAACTGATGTACAGATCTGGATGTGT
AACAAAGATAATGACTTGAATTTTTCAATGATAAGAACCTTTCCATGGAAAACAGATGTG
CTAATATTATATAATGACATACTAGTTGGTATAATTAATCCGCACATCGAATGTCATTCA
GTTACGGGTGTACGCCTCGGAAGTCTGCCTACTAGCGAAGGTGAAGGAGAACCAATTAGT
ATCACTCAAACAAATAAATACGTTATAATTGTTACTTTGGACGGAACACTCAAACTAGCT
GAGATCACTAAAAAAGGACTAAAAATGCCATGTCCCCCCAAAAATTGTTATCAAGTTATT
GAAGATTTTGGTGAAGTTATGAGAGCATCTGTAAGTTGTAATGGACGTTACATTTGTTTG
AGCGTAGCTAATTCCGGTTTAGCCCCAGACCCAAGGATTTACTTATGGGATGCAGCTAAC
GATATCATAACCAATATCCTCATCGCTGAAAGTTCAAAACCTCCATACCAAACGGTACCT
ATTGCAATAATATGGGATAACAGTGATCCGAGAATTGTAGCCGTACACATGAGATCAGCA
GAATCAGATAAAATCTATTTATTTTTCTGCCATGAAGGAAAACTTCATGAATACGTGAAT
TGGTGCCCCGCGACGGAAGATTATGTTCAAACGGATTTTATACTTTGTTCCTTATGTAGT
CCACACGTAGTCATATTGTCGCAGCAAAATATAAAGAGACTTTTGATGAGTGAATTTAAA
GATGTAAACGACTGCGATGCAAGCACAGTAAAACAAGTTTTAGATTTCCTTTATTATACG
ACAACAGGAAACTTAGAAAAGGCTGTCGTCGTGGGTTCTAGTATTTCTGGTGGTACCAGC
CAGGTGATTTGGTATAGCTTAGCAAAGATGTGCGTATCTCTGAAACGACCTGATGTAGGA
TCAATATGTCTTAGCAAAATGGAAAACATAAAAGGTGCTCTAATGATGCGTAAAGTCATG
AATGACAACAGCATGGATGACAACTGCAAAGTAGCAGTGCTTGCTGTAAATCTTGGTATG
ATAGAAGAAGCCGAAAAGCTATTTCGTGAAGCTCAAAGGCCTGATCTAATCACTCGGCTC
GTATCAGCAAAGGAAGGTGGACTACTTCAAATAATTGAAGGAAATAAAGACGGTGAAAAT
ATCTTATTGATTAAAAGTGCACAACACAAATTAGCTAAACATTTGTGGTCTAATGGAGAA
ACAAACGCATCGATTAAGCTATTTGAAAGTGCTGGAACTTTAGTACCACATGTTCCCAGA
ATCTTAATAGCTCAAGGCCAAACATCGGTACTAGCTCAGCATGTAGCTAATTCAAATGAT
ACAAATTTGATAACATGGTGGGGACATTATTTGGAAAGTTTAGGCGATCTAGACGGAGCG
CTTTCAGCATATGCCCGCGCTAATGATTTCGGTGAACAAACAAGGTTACTTTGTCACATG
GATAGAATAGACGAGGCAGAGAAGTTATGCCAAAATAATCGAACCGCTATGTACCAAATG
GCCCGCTATTTTGAAATGCAACCCGACAAAACTGAAAACGCTGTAAAGATGTATATGAAA
AGTGGTGCTGTGTCGTCGGCTGTCCGTGTTGCAGCTGAGGCAAGCGCTTGGAATCTTGTT
TGGCGAGCTGGCTCTTCCTCACCAACTCACGCTCTATACGCAGCATCTATACTTGAGAAT
GCTGGACAAATAGAACAAGCGATTGCGTTGTATCAAAAAGCGGGAAAAATACATATGGCG
TTAAAATTAGCTCTGGATTCCGGTGACACAAACGCAATGGTTGCTGCTGTAGAATCATTG
GGCGATCGAGTAGACCCAGAAGTGGCTCACACTCTGGCATCACATTTACGGAAGGCAAAC
CATCACTCGCATGCAGCTGCACTTCTAGCTACGGCAGGAAAATATGAAGAAGCATTAGAG
TTGGTGGAGCAAAGCTCGGCACCATTGTCGGAAGAATTGAGTGAAAGGTTGGCCGCTCCT
GCCGGGACTAGTGGACGTGATGTCCTCTTGCGGCGCCTCGCTGACGTGTTAGGCACTCGC
GGCCTATACCACCAGGCTGCCAAGCGTCTTGCCCATGCCGGCGATAAGGCAGGCGCGATG
CGTTGGTTAATGCGTTCCGGAGACGCCGACCGCATCGCTACGTTTGCAGCGGCAACACGG
GATCGCAACGCCCAATTGATGGCGGCGGACTACCTGCGACGCCACGCCGACTGGCGAACG
AGACCGGACCTTATGCGCCATATTTTGCATTTCTACACGAGAGCTAAGGCGTACAGTAAA
CTAGCCGCTTTCTACGCGGAATGTGCCAAGACAGAAGTCGATGAGTATGACAACTATGAA
AAAGCACTTGAAGCTCTAAAGGAAGCCGTCCGTTGCCTGGCGAAGTGTACTGATACAGAA
ACTGGCTCTCAAACGATGGCTCTACAAGAACAGAGTACCCTCGTCAAACGATTTCTGGAC
GTGAAAAAGATATTTGAGTCTGGAGAAATCAGTGCTGGTGTAACGGGTGGTCAACAACTT
CTTCGAGCCGTCAGCGGTCGATCCGGTCTCGTGACAGAAGAAAAAGTCCTTCGCTTATTA
CTTAGACATGCTCCTGATCACGGTGATTTCGAGCAAAAACTTAGGGTTATACAGAGAGAT
TCCACAGATGACGACAGACAAAGTACGGGGTCTCCAAATCAAAGTATCGAAGAAATCGTC
TAACTATGAAATTAAAGTTATAGATTTATAAATTTTGCACACGAGTATTACTCACAGTAC
TTATCATTGCTATTGTGCACGATAGTTTTAAATATCTGGTATCACCTAGATGATGA
(3116 bp)

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