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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4750_c0_seq2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.48 TPM:1.60
ORF EntryO_BomoOtmSK1200_3prime_partial:A_BomoOtmSK_comp4750_c0_seq2
Sequence
(Nucleotide)
TGACGGTGTCGTCTGGATTGGACGCATGTTAAAATTTTTCCGAGTGATATTATCTTGTTG
ATAAACTTAAGCTAAAGCTAGAAGTGTTGAAAGAAACATTAATTAATTTCGATAATTAAT
ATTTTCAAACTAAAATTGAGTTATGATCAATAGTGTTGTTTCCTTTGTTGTCCTTCAAAA
GACGCTGTGAAATGGTTGGATCTCGGTCCTTGATGGTTTATGTCGACGTCCTCACTAACT
GAAGTGAAAGTTGTTGTGGTGAAAATGCATCTCTAAACAGTGAGTGCTCCGTACCGGAGA
TTGGAAAACTTTGTGAATGGAAAACGTGAACTTCCAACCGAGTGGCGAAGATATAGAACG
GGCCCTGATGGACCTGGGGCCGCTTCTTGGTGTGACCATCAAGGAAGAGGTGCCCGATGA
TCTGGCCGAGCCAAGTGCACAGCCACCCTCCCAACTTGCTGTTGGGAGTTTGCCTGATGC
ACCAGTCGCAGGTGGATCTTCAGTGGCAGAAGGGGAAGCAGTGGAAAGCAATGATAAAGG
TTCTGCAGATTCCCTGGCATCGCCCACCACGGGCCGAGCGCCTCTATCTAGTTTGAGATG
TGTGCTGTGCTACAATTCATTAGCAAGCTTAACTGGAACACCCAAGCTCATGGAATGTCT
GCATTCAATTTGCGAGACCTGCCTCAAAATCAAGATAGAGATGATAAAAAGTGCCAACAG
CACAGAATTTCTTGGTGCAGAAAGGGTCACAATATTGTGTCCGATATGCAGGTTTGAATG
TCAACAAGCAAACATGATAGACCAGCGTTTCTTTATTGAGAAAATGGCTTTGGAGCAAGT
TGGAAATAATGGCGCAATAAGCGGTGACCAGCAGTGCAACAGCTGCGAGGACACGGAGCC
GGCCACCAGCTACTGCGTGGACTGCGCGGAGTTCATATGCGACAACTGTGTGCTCGCACA
CCAAAGACTGAAAATAACAAAAGACCACACGATAAAATCTAAGGAGGAGGCGGTGGCGGA
GCTGCAGGCCGCGCAGGGCTCCGCGCGCAACGCGCACGACATGTACTGCACCGAGCACGT
GCAGGAGCGGCTCTCTCTGTTCTGTGAGACGTGTGACCGGTTGACTTGCCGAGACTGTCA
GCTGCAGCACCACCGCGACCACAAGTATCAGTTCAGCACCGAAATGGCCGCACAGGCCAG
GTCGAGCATCTCATCTCTGCTGTCGGAGGTGAGCTACAAGCGCGTGCTGCTGGGGTCCGC
CATGAAGGTCATCCGTGACCGGCACGCGCTCATCGCGGACAAGAAACGGGCGCTCGTCCA
CGACATCACGCAGACCGTAGTCAAGTTAGTGCACAGCAGATG
(1362 bp)

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