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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4682_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_YTHDC2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0008186 F ATP-dependent activity, acting on RNA
GO:0016787 F hydrolase activity
GO:0034612 P response to tumor necrosis factor
GO:0044822 F RNA binding
GO:0044829 P positive regulation by host of viral genome replication
GO:0070063 F RNA polymerase binding
GO:0070555 P response to interleukin-1
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:2.49 TPM:2.69
ORF EntryO_BomoOtmSK1168_5prime_partial:A_BomoOtmSK_comp4682_c0_seq1
Sequence
(Nucleotide)
GTTTTGCTTATGTAAACAAATTAAAGAATACCATGTATTTTGTATCTTGAGTTATTTACA
GAGAAACGTAGTGGTATATTATCGTTGTTTTCAGGTAGCTAGTAGTGTTCATTAACAATG
AGTTCGAAAAAGGGGAAACGAAGTGCTGGGAACAAACACTTCCCCATTGCGGAGTCAGTG
AGCATAGCGCTGAAAATTCAGTTGGACAAGTTCATCAGTGATGACAACGAAACCGAACTT
AAGTTTCCATCGTTCTTGTCGGCTCAAGAGCGCGGTTTTATTCATGAGACTGTTGTTAAA
TTAGGACTCAAATCGAAATCGCGCGGGAAAGGTGTCAACCGCTATTTAACAGTCTACAAA
AGAGTAGGATCATCAATAATACAAAATGATGCAAAACTCATTTTGGACTCTAACATGAGG
TGTAGCATTGCAGAGCTATCAAATACTTTTCCCATCACTAACAAAGAGAAGGATGATTTA
AGCAGCTGTCCTGAAAAGGAAAGAAGCCCTCAACTCTCGCACAAGAGTTTGGGGCAGCTC
AATAATGGAGTTGCACAGATTCCGAACACAACGTACAATCCAGATTTATTGAAATTCAGA
GAGAAACTTCCTGTTTATGAGCAGAGGCAAGATTTAATGAATGCCATCGTTCACAATCAG
GTCATTATAGTAGCCGGAGCTACAGGGTGTGGAAAAACAACACAGCTTCCACAACTGGTG
CTGGAGTATTGTCAACAACGTGGTCTTCCAGCCAGACTGTACTGCACCCAGCCGAGGAGA
ATTTCAGCTGTGTCTGTAGCCGAAAGGGTAGCGTATGAAAGAATGGAGAAAATAGGACAG
TCAATTGGCTACCAGATCCGTCTGGAGTCGAGAGTCAGTCCTCGAACGGTGCTCACTTAC
TGTACCAACGGGGTGCTACTCAGAACCCTCATGGGAGGAGACAGTGCACTTACTGGCGTG
ACCCACATACTGGTGGACGAGGTCCACGAGCGCGACAAGTTCAGCGACTTCCTGCTGATC
GCCCTGAGGGACGCGCTGCCCAAGCACAAGGACCTCAAGCTCGTGCTCATGTCGGCCACC
ATGGACACGCAGATATTCTCCAGGTACTTCAACAACTGCCCGGTGATAACCATTCCGGGG
CGGCTCCACGAGGTCCAGCGGTACTATCTCGAAGACGTACTGAAGATAATCAAATACAGA
ACGCCGAAAATGGTTCAAGTTGAAAAGGAACTGAAGAATAAATTGAAGTCCGGCAGGAGC
TACTGGTCGCAGCTGGAGACTCAAAAAGCCGAAGACGGACCAAGTAAGGAGGTTAAAGAA
GAAAAGGAGAATGTTCTGGATGCAGGTCTGCAGGCAGACATGGACGAGTTCATCGATGA
(1379 bp)

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