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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4623_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		sphingomyelin_phosphodiesterase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006685 P sphingomyelin catabolic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0023021 P termination of signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0043407 P negative regulation of MAP kinase activity
GO:0045121 C membrane raft
GO:0046513 P ceramide biosynthetic process
GO:0046872 F metal ion binding
GO:0061750 F acid sphingomyelin phosphodiesterase activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:2.65 TPM:2.86
ORF EntryO_BomoOtmSK1122_5prime_partial:A_BomoOtmSK_comp4623_c0_seq1
Sequence
(Nucleotide)
TGGTGACTTCTCGAGAAATCAAAGAAACGTTATACAAATTTGGATTTTTGCTTGTGTCTG
CGTTCTTCATCTCGTTATGATCATTAGAATATTATGGCTTCTACTACTGGTGATTGTTTC
AGTAAGCCCCTGGACATTAGGTAACCCAATATTCCTACAGAAGCCTGGTAAGCCAAACAG
ACCTGTGATAAAATGGAATCCTCCAACGGACACGTGGAACTGGACTACGAATCCCCGAAA
CGAGGAACCGTTTTTTGTACCGTCAAATTTTACGCATAAATTGCCACCATCGGCCAATGA
AACCGAACTCATAGCTCACATGGCAGCTTTGAAACGTAACTATTCGCGGCTCCTCTGGGA
TAACGATAAAGGCACGAATTTACCTATGTTCGTTGAAAAAGCATTAAAACTACTCAACTT
GAAACAGGTTTATTACGAAGTTGAGCATTCGGTGATGTCCAAAGTGTCGTGCACCGCGTG
TAAGGCAGGCGCAGGACTGCTGCAGCACTATATAAGGCTCGGTAAAAGTAAAGATGAGAT
CAACAAAATGATTTTTCAATTTTGCGTTTCTTTAAAGATTCAATCCGCTCGAGTTTGTGA
AGGAATAACGAGATTATTCGGGAGCGAAGTGGTATATGTTTTGAAAAGAATAACAATTGG
CCCGGACGAAATATGCAGTTTTGTGATTGGTGACGCTTGTGGCGATGTTTATAATCCATA
TCACGAATGGGAAGTGGCTTTCCCTCCGGTGCCCAAGCCGACTGTGCGACCTCTCGAATC
ACCGTTAGAAAAGGCACCCACATTCAAAGTATTGCAGATTTCAGATACGCATTTCGATCC
TTATTATGCAGAAGGTGCTAATGCCGAGTGTAATGAACCACTTTGTTGTCGTGCGTCTAA
CGGACCCGCTCTGACCCCGGGTGGCGGAGCAGGACGTTGGGGAGACTATAGAAAATGTGA
CACACCGAAGCGCACTATTGATCACATGTTGAAGCACATTGCTGACACACATACAGACAT
AGACTATATATTGTGGACCGGAGATTTACCACCACATGACGTTTGGAATCAAACGAAGGA
AGAAAATCTCAAAGTTTTACAAGAGACTGTTGCACAAATGTCAGATATGTTTCCTGGAGT
ACCAATTTTCCCAGCTCTAGGAAATCACGAATCTTCTCCGGTAAATAGTTTTCCACCGCC
CTACATATCTTCGCCGGACCAAAACATCGCTTGGCTATATGACGAACTTGACACGCAATG
GCGACGTTGGCTTCCTGCTGGCGTGTCGCACACCGTACGCCGGGGCGCATTCTACTCGGT
ACTAGTGAGGCCTGGCTTCCGTATAATATCGCTTAACATGAACTACTGCAATAATAAAAA
CTGGTGGCTATTGATGAACAGCACAGACCCCGCCACGGAGCTGCAGTGGCTGATTTACGA
ATTGCAGTCGGCAGAGTTCAGCGCAGAAAAAGTCCACATCATAGGTCACATACCCCCCGG
ACATTCCGATTGTTTGAAAGTGTGGAGTCGAAATTACTACGCGATCATTAACCGATACGA
ATTAACGATAACGGCTCAATTTTTCGGACATACACATTTTGATGAGTTTGAAGTATTCTA
TGATCCAAATGACCTCGGTAGAGCAACAAGTATAGCATACGTTGGGCCTTCTGTATCACC
ATATTACGATTTAAATTTGGGATACAGAATCTACTATGTAGACGGTGACCACGAGGATAC
TACTAGGCAAGTGGTTGACCACGAAACGTGGATTATGAATTTGAAAGAAGCAAATCTGTT
TGGATATCCGATATGGTATAAGTTGTACTCGGCCAGGTCTGCGTACCTGATGCCGGCGTT
GCGACCGCAAGACTGGGACAAGTTTATTGACGACATGACCGCGAAAGAAGAAGTTTTCAA
TTTGTATTACAAACACTATTGGAAGAACAGTCCCCGCAGAGGTATGTGCGACAGTGAATG
TCGTAAGCGATTGATTTGCGACGCGCGGTCGGGACGATCACACGACCGAAGGGCCCTCTG
CGTGCACATCGAAGCACGCATCGACGGCGCCGCACCCACTCCACAGACTTGGAGAGCTTG
GCTATATAATGGCTTGTCTGTTTCAGATGAACCTAGCGTACAACAAGTATAATGGTGGTG
GATTTGCTTATTGATTCCAGGTCTTATTTTAAGGATGTCTATGATAATGCAATTACCTCA
AGTTGCCTATCAAATACCAAAGTTCGTGCTGGGACTCGGCTGAATGCAAAATCTTTCAGC
TTTGGAAATGATGAATTATACCACCGGTTATCTCATGACACATTATATTCTGATTTAAAA
ACAAATTCACTTTTAATATAATAAAGTGCCTTATTCAAATGTCA
(2384 bp)

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