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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4603_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		syntaxin-16_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006906 P vesicle fusion
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0031201 C SNARE complex
GO:0031985 C Golgi cisterna
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043231 C intracellular membrane-bounded organelle
GO:0048278 P vesicle docking
GO:0048471 C perinuclear region of cytoplasm
GO:0090161 P Golgi ribbon formation
Transcript
Level		FPKM:1.17 TPM:1.26
ORF EntryO_BomoOtmSK1114_3prime_partial:A_BomoOtmSK_comp4603_c0_seq2
Sequence
(Nucleotide)
GCTCTTCCGATCTCCGTACCTTGTTCGTGGACCATGTGAGCCAAATCCTTGAAGATCTCA
TTCAAGTCGACTATAGATCTAACAACTTTGTTTACTTCTTCCTCTCTCTCTGCGACCATT
CTTGTGTTGGCTTCCTGTATGAGCAGCAGCTGTTTCTGATTGTACATCTGCTTAGGCTGA
TCGTCCGTTCGGTCTTCGTCGTAGAAGGTTTTTTGGGTTCCTGACGTGCTCGGTAAGGCA
AACAACAGGTCCGTTTCATTGTCCGTAAGTCCCGAGGGGAGCTCGTTGTCATTTAGACTC
AACTCTTCGAAATTCGGGAGATCGAAGTACGCATTCGACCTTTCTTCTCTGGACGTGAGG
GATTTTAAATAATTCGATTGCGCTGTTCTGAAGATCACGCTCAATTCCTGCAGAGTTGTG
ACCAGTGCTAGTACAACGTTGGCTGCTAGTTTTTGTTCTGTTTTGTTACCGTGTCTTATT
TGTGCTTTAATAGCTGTGAGGTGTGTATGCGCATGCGTGAAATGCCTTCCAATTTCAGTG
CTGAGTCTCTCTATATGCTGTTGTTCAGTGGAGTCATCTAGAGCGGGCCGATTGATTTGT
TTCTCATGTCTAGCTTCTAGTTCCGATAGTTTAGTTTTTAGTCTGGTCATAACATAGTGA
GCTTCCTCTAATGCATCAGCCCAGGGCGGTGGGGCACGTGAGTCAACTCTCATCTCAGCT
CCGGCTTCCATATCATGAGAGCTTCGTCGCATAAGTCTAGCACGTTCTGAATCATTATTT
CTTTCTGAGAATATTTGTCGGCTGTGTATCGCGTTGTTACGCATTAATACGAATACTTCT
GTCAGACTTCTCGACACCATGTTCGTATCGTTATTTTTTTATTTATTATTCACGTAAATT
AAGGTGGTATTAAATACTGTATTACAAAAACTGCAATGTATTTATTTTTATAGTCTTGAT
AGTGT
(965 bp)

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