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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4580_c0_seq1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		ankyrin_repeat_and_sterile_alpha_motif_domain-containing_protein_1B_isoform_X3_[Bombyx_mori]
Ontology
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006929 P substrate-dependent cell migration
GO:0016322 P neuron remodeling
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046875 F ephrin receptor binding
GO:0048013 P ephrin receptor signaling pathway
GO:1901187 P regulation of ephrin receptor signaling pathway
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.51 TPM:2.70
ORF EntryO_BomoOtmSK1105_5prime_partial:A_BomoOtmSK_comp4580_c0_seq1
Sequence
(Nucleotide)
GCAGATAAAATAAAAAAAAAAAGTAACTATGTATATCTTAAAATTTATTTTGAAAATACA
CACTTGGGAATGTTGCGTTCCAATTTTTTTTTTTTTTAAATAAATATCGAAAGTTTGGTT
ACCGCGTTTTCACAGTTCTTCGGTCGAAGCTATAGGCGCTTTGAGTAATGGCGTCCTCGG
ACTCCGCGACCCGTCCGCGCTCCTAGACGCGGCCTGGAAGTCTTCGTTGGAGAGTGACGC
GGGTAAGGCGGCCACCTTCAGCTGGTGACCGTTCAGCTTGATCTCGGTTATCGAGTGCGA
TCGGCCGTGGTTCAGACTCTGCTTCTCCTTGTTGCTCGTCGTCACAGGATCGTGCGTGGG
GGTTTTCGCCAGGGACTGGGTCACTTTGGTGCGATTTGACTGCTCCCTCAGCGCCATCTG
GTAGGCGACCTCGAAGGCTTCGCCCAAAGTCAGTATGACTTCGGTAGCTTGGTCCATTGT
AGCCACTCTGAACACGTGACAGTAATGACTTCTCGTTGTGTGATCCTTAGTTATGTACGC
GAAGTGAGTGAGGTCGTCGGCGTCTTGACAGGCGCAATGGATATTCCTGATTTCGTGTTC
ACAGATCAACTCCCTGGTAATCGTATTTAGGAACTTGACCCCTCTATAACTGATAGAGAG
GATGATATCGGGAGAGTCTTTCGGTTCTTTGGTCGTTTTCTTTAGCTTCTGTATCGATTT
CTTCGTGGATTCCGTCCCTCGTAGCTCTTTGACCACCGTCGATCCTAGATAATTAGCTAC
ATAAGTCACAGCCCCAGTTACCAGCACAAACGGCTGATGTTTCCATTGAGTCTTCAAAGC
CCCTGGGACCCCGACCAGCAGCTCCGAAGGTGCCCTGATCTCCAGGTCTGAAGGTCGCGG
AGGTTGTGGAGCCGGTCTGTTTTTCTTGCTCCGCTTTAAGGTCTCGCCTCCGGGCGGAGC
TAGCGATGGTACCACGGGAGGGGGAACTGGTTTCAGATTATCCGAAGGCAGCTTCTCTTT
TATTTCCTCTTTTAATTGTTGTATATTATTTTTCAGAGTGTTGAGATCAGCACTGATATC
TTCCATATTATTAGCTGGTCCGTTGTGTTGGCCGCTAACCGACGCTAGAATCCTTTTCCT
GTGACCGGCCTTCTGAATCTCCAGAACGGCCGTGAGCTCCACCTCCCAAATCCTCTTCAC
CCTATCCATATCCACGTACAAATGTTTCCTGAACGTCTCGCTGTATTGCTCCAAGTTTAT
ATGCCTTAGCCATTCATCGACTGATTCGTTTTGATTCTTACTAACGTTATTGTTATGGTT
ATTACTTATTTCAACTATTTTAAGAGGTAATTGTTTGGATGATTCTAATATTTTTTGTCT
ATCGTTCTCTTCTATTCCCATCTCGCGAAGATCATTCTCGTCTAGGATACCATTAATAAA
ATCAATGTCGTCATAGCCACTATCCAGGAACAATGTCTCGTAGTCGTGCATCCCAATCCC
AGACAACCAGAGTCCGAGACTAGAGGCCATAGATGGACTCAGGCTGGACTCGGAGCAGCT
GAGGCCGAGTCTGGATGTAAATTCTTGCTCGAGTTCGGACACAAAGACCGACTCCCGCAC
CAGTTTGCTGCCAAACGACGCCATTATCTCGGATATCTTCGCCCATTCCTCCTGTTCGTC
AAAAGGACTGAGTATGGACAGCGATTTATCCCCGCTATGCGTTGAGCTGGTGGTGTTGCT
CCTTCTTCTGACTTCGTCTTCGACACCGTTGATGTTCCTTTCGTGAGCCTGTCCATTGCT
GGTCAGGGTCGCCGTGTGGATGACCGGCGGCTCTGTCGGCGAAGCGTCGTAAACTGATTT
CAGTTTTCGCAACGTTTTCGGCCTCTCGGCTGGCATCGGCCGAAGACCGATCCCGTCTAG
CGTTGTCGTGGAGCCTTTGAAGAGGCCTGCAAACGGCACGTCACAAACGTATTCTTCGAC
GCAGTTATCAGTATTTCCGCTTCGATCGGTAGCACCACTGGCGACGGACGCTTCTGAGGC
TGCTCT
(2046 bp)

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