SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4474_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		zinc_finger_protein_628_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.37 TPM:1.48
ORF EntryO_BomoOtmSK1043_3prime_partial:A_BomoOtmSK_comp4474_c0_seq2
Sequence
(Nucleotide)
GTCGGGTGTGCGGCGTGCGCGGGGCGCGGGGGCGGCGTGACGGGAGAGGGGGCGGTAGGC
GGAGAGGGCGGCGTGGGAGGCGGCCGGGGAGGACTTCGTGCTCGTCGTGACCACTGCTGC
GTGCGCGCTGACGTCATGTTCTCCCAACCGTTCTCAATTGTTTCTGAATTCTTTTTTCTC
CTTCCCCTTTTTTTCTTTGGTTTAACATTTTGGTTTTTTTCTACATCTTCTGAAACAAAA
TCCATTTCATCTGCATCTTCAGGTACATAAGCATGCACCTTCAGATGATTCATAAGATCA
CATTTTCGAACATATCGTACGCCGCAAAGATTACAAGCGTGTGGTCTATCATTCTGATGT
GCAACCATGTGGTTCATCAAGGCGGCTTTTTTACGGAACCGCCGTGAGCAGAAATCGCAT
GGCCATGGTCGCATTGCAGTATATTCATCTTGATCAGTTGGTAATGGAACATCTACATCA
TTTTCTTCTTTTATGTGTAAAACGGGATGTGTTAGCTGATCTATAGGTACTTCAACTCGC
TCTTGTCCACCTGGGGTAACCCAATCGTCAGTGATAACTTCTTCGGTTACACATTCCACA
TTTGGGTCTAGCTCAGGATCAACAAAGCTGACAACATCCTGAGCAAGATACATCAAATTC
TCGGCAGCTATTTGGTCGATTTCTGATTGCATATTTCCATAGCTTTGAATATTTTCTATG
GAACATATAGGTCCATCTGCTCTGGAATGACTGGGACTATTCTTTATAACAACCTCCTCC
TCCCAGCGGAGGTTGAATTCTTCACCATCCATGTTATTTGTTGAGTTCAATCATTGTACT
GCATTTAAAAAAAGTACTTGATTACCTTGAAATATTTCCCAATTTATTAAGGATAATGGA
GACGCACTACAACATAGCTATAGGTTTTTATGACGCAATCGAGAACTTATCAATAGTTCA
TCACCGACGAAAACAAAAATATAACCAAACTGAGCT
(996 bp)

- SilkBase 1999-2023 -