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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp4444_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DHX35_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:3.19 TPM:3.44
ORF EntryO_BomoOtmSK1019_3prime_partial:A_BomoOtmSK_comp4444_c0_seq1
Sequence
(Nucleotide)
CAGAAATGAACAAAATAATTGTATTTTTTGATAATAACAATCGGCAATCAATTTTGTTTT
CTTGTTTAGCTTAGTATTAAAAAAGTTTTAATAGTGTAGTGAATGTATATAAAGAGAAAT
TTGTGTGTTTGTTAATCACGATGCTTGGAAACCGCCTAAAATTTGTTAAACCAGAAGACG
AATCTCTCTACCCAATTCGCAACAAAGATGGAGCCATCGAAACACTTATAAATCCGAACA
CTGATTCAGCACTTGTCATTGATTCTGACTCACACTCTAATTTCGTTTATAATCGCTACC
ACCACTTACCTTTAGAGAGTCAAAGACAGAAATTACCAATTTTTCAATACAGAAATCATA
TTTTATATTTGCTGGAGAAGTATCAGACTTTAGTGCTCTGCGGAGAGACTGGATGTGGAA
AATCAACTCAAGTGCCACAGTATCTGCACGAGATAGGACACAAAGTGTGCGTCACACAGC
CAAGGGTCACGGCGGCTGTGTCGCTTGCGTATCGCGTGGCCCAGGAGATAGGAGGCGCAA
TCGGTCAGGAAGTTGGCTACGCCGCCGGCATGGTATCCGCCAGGACGCCAGAATCTGGGA
TTGTGTTCATGACGGAAGGCGTATTGCTTCGAGAGATGTTCGCTTCGCCTCTGCTGATGC
AGTATTCTTGCATCATACTCGATGAGGTTCACGAAAGGTCACTAATGACCGATGTGCTAA
TGGGATTATTAAAAAAAATAATTAAAAAAAGAAAGAATCTCAAACTGGTGATATCATCGG
CTACGATGAACGCGGATTTCCTGAAGGACTTCTTCAACACAAGCGACAAGAAAGACAGAA
ACAAACCCGCCACTTCGGTTGTGATGTCCGTGCAGGGGCGCACTCATCCTATTGAGATAT
ATTACACTCAAGAACCAGTTCCGGACTATGTGAAAGCGACCGTCGATACAGTCATTAAAA
TACACGAAAATCAACCGTTAGGTGATATTTTGGCTTTTCTAACTTCGCAAGAAGAGATCC
ACGCGGCCCTAGAGAGCCTCGAGCAGTACTCGGAGCAGACGCAGGAGCGCAACAAGTCCC
GCAGCCACTTCCCCAGCGGCATCAGGGCGGCGGAGG
(1116 bp)

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