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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14880_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		CBP80/20-dependent_translation_initiation_factor_isoform_X1_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:26.07 TPM:28.11
ORF EntryO_BomoOtmSK14171_complete:A_BomoOtmSK_comp14880_c0_seq1
Sequence
(Nucleotide)
TTTTTTCTAATATTTTATTGTTATAATCCTTTAAGTGCTTTATTCATACAAAAACTACAG
CGGTAACAAAAAACAACGTTATTGCCCGTAATAAGATTAATGAATAAAGATACAATACAC
CAATATCTCTTTTGTTAGCACCATTTTTTTAATTTCAACTTTTTTCTACAAACGTATTTT
TAACTTAAATCGCTAAGAATGCATTATTATGAAAAGTCAAAGGTCTTTTTAAATAATATA
TTTCCCATATTATTCATTTAAATTAGTTTGATAATTATATATTGATAAGAGCTATCTAAG
GTTAAGTTAATGAACGTCTCCTCGCTCACTCGTACACAACCTCAGATAATGAGCTCGAAA
CAAGAAATTTGGTCCAGCTTCAACAAGTTTTCTTTTTTGTTAATAAAAAATAAAAACGAA
ATATCCCATTCATTACAGTCTTTGGTTAGGACAGAAAAAATATACCAGAAACCTTAAATT
TATAATATCACAAGCATAAAACAGAGATAGTTTCACTTCCACAAACAATTCAGTCAAACG
TTTATTTTTTTAATTTTGATACAAATCCTAAAACATTTTTGAAACATAAATTAAATACCT
GAGTGCAATGAAGTACTAAATTATGTTGGGAATAAGTGCATTGTAACTTAATTACTAAAC
ATAATTGAATCCTATGCAAACGATACAACAAGCAAGATATTTAGTGCTATTAATAGATGG
CAATGTATACCTAAATTAGAATACGACAAGGATACAATGCACAAAGTACTATGCGAGAAT
CGTACAGTAGTGTACACTGTCAATTTGTCCAAACAAATTAATCTACAATGTACCTTTTTA
ATACTTTCCAGGCATAAAGATTTTTTTTTCGAATCCACCTTAAGCTAATAACAAAATCTT
ATAAATACTACACTTTACCACACTTTCAATATTTTTATTAAAATTTGTTGCATGAAAGTG
ACGATAAAATGTTAAATATCCATTAAATTATTTTAAAGGCACAATAATATGAGCTTATGG
CAGCTTTATGCCTACGACAGAAGACAATTCCATACCTCCTGTACATTAACTAACGCAACA
GTACTAAGAAAGAAACACGAGCGAACACTCGATTAAGAAATGCTCGTAACCTTTGCTTTT
TGAAACACGATCCTTTCTTAGTGAGAATAACAAAGAATCTATAAATCCCACAAGATTAAA
TTCAGTTCGCGACTTCCATCACATCAAGATACTCACGATAAAACCCTCATCCGTCTAAAT
ATATTAATTTATTTAGCTCTAAAATAAGGCCAATCATCAAAGATGATTTAAAATGATATG
CCCTGCAATAATATCCATAATGTGAGATATTAACGAACATCCGATTCTAGGTTTATATGG
ATGACAATATCATTGCAACCTACCACCTTGCACAGCGTGCTATTTGGACGAAGGATAGTA
ATAAAGAACTGCGCATCCTGGTAACTGCCACCGGGATGCGTGAAGCTCTATAAGCTGCAG
TAAAGTACGCCTGATGGAAGGAGCCGCGGCAGTATTGAGGAAAGCGTCACGGACGGCTGT
AAGTAATCGCTCCAAATCTCCAGGTAGCTGAGTTTCCAAGTCTCGGCCTATGTACGTCAG
TACGAAGAACAGATTCTCAGTATCACTAGCAGAAGGCACCGGCTGCCTGATGCAGTCCTC
GCAGCACTTGCAGATGAGCGCGAGCAGCACGTGCCCGGGCTGGGCGCTGGCTCCCCGTCG
CTGGATGGCCCGGCGCCGCAGCTGGCAGTACATCTCCAGCAAGAACGACAGGAACGCCAT
CAACCGAGGTCGACCACCGCCGATCATCGCGCCCAACAGCTTGTCCCTATCGTGGTACCA
TTGCTGGCACGTGTTAAGCAGCGACTCGAGGAAGGTTTCCGTCTGCTCGCGCTCAACCAC
GGCGATGCAGCGGCGGGCGGCCGGCAGCGCGTACCGCGGCGACTCCACTGCGCGCGAGAC
CAGGTGCCCCACAGCGTCCATCAGGGTACGGGCGCACACAGCATTCGGATCTTCCAGGGC
TTTATCAATACACTCTTGAATCTCCGGCGGGAATGTACCAAGGTCGCCGGCGTCGGCTGC
CAGACCCAGGGCCGCCATGCCACTTGCGAGTGCATCCGCTGACGTTAAGGACTTTGACCT
TTTCAATCCTGGTGTAAACGATTGTGGACGGATGCTCTTCCCGTTACCATTCGTCAGCGA
CGACGGAGGGGATTTCTTCTTCTCAGGAATGATAGTCTGTGGTTGCAGCTTGAAGTGCAC
GCGTGGCCCCTGTGCATGTGGCACGTTCCCGCTGGAGGCGCTATTGAGGAGCGCGTGAGG
CGGCATCACGGGTCGGTAGTGGGGCGGCACCTGCGCGTGCAGCACCGCCGACCTGGAGTG
CTGCAGTCCCACACTAGCGTACCCCACGCCCAATGCCCCTCTATTGTGTAGGTCAATCGG
TTTCGCCATTGTGAACTCCTTTGCGTGCACATTCAGCTTGTTGGTGGCCGCAGCACCACT
GCCGGCAGCCGTGGTGGTCGTACAGGCGGCACCAGCGTTCGTTGACACCACGCCGTCTGT
GCGGACACCTGGTGGCCTGTAGATTTCTAGAGTCGGTTTTCCCTTTGCGTTGGTGAGGAT
CATACTCCGTCGTTTCCCATTATTTGAAAACTGGTGATGATGCATGTTGTGATGCGACTG
AGGACGTACGAAGCTCCGCTCCCTCATGATGACGCCAGGCGTGGCGAAGTCCTGGATCCT
GTAGCTCCTCTGCAGATCATTGCCGGATCCTAATTGAGTCTGCATCTTGACAGTTACGTA
GCTTGCTCTCAAACACGAATTCCCTTCTTGCCTTCAGTGCACTCGACCGAAGTTTTCGTT
AATAATTTCTTTTAGTAACAATTAAATTATGATTTTACAATAAACACACACTAGATCGAT
GACTAGTATTATAGTATAACGCGATGTCACATGTAACATATAAATATTGTTGATATTTAC
AACGTAATAAAAGAATATTAACTACAATAAATACGGGCAATACGAAATGCGACACGGCGA
ACTAATTAACAAGATCACAATTCAATTAATATTGTGACGTCACTTTAGAGATCACTTTTC
TCCGATTTATATATGCATATATAATAATAATAAAGTATAATAAATATCCCTCTTCGTGGC
CACCGAGAGGGCGTTAGTTCGTATTATATTTTTTTTTTCGTTTTTTTTTTTATCTTTTAT
TTCTAAGACGTTTATCATACAAGAGCAGTGCAGTGATGTGTCAATGCCTGGCAGTCACCG
AGCGATTCTATACAATATTTCGAGGGGCTGAGAGTTTCTGCAGCACGAAGCTCGAATCGT
TTTCGTCGTTGGAGTTATATAAACCCTAATCGCTCTCTCGTAGTGCGACGTGTGGCGTCG
TACTCTGCACTCGAGGCTCGTTCACTTTTCTCGTATTTGATTCACAGAATCTTGCGCTCG
CATTTTAAGTTACAGCGGTACGCGGATGCGTGTTTTATTTCACTGAAATTTATATTCGTT
GGCACCGCTCGTCGCTCGCGCAGATTCCGGTCGTGTGGCGCCCGCCCGGGCGGTTTGCCG
ACTGACGAAGCGACGCGCTCTCACATTAACCGTCTCCGAGTTAAAACTCTCATTATCACA
GTGTCCTTCTTTAAACTATAAACCTTAGTTTAAGCCATCAATCGTGTAGTTCATTTAAAA
CTGTATTTCCTACGACAACATTAACACGTGTAGATCATTTTAAGATTGCAAAGTATCTCA
GTGTCGAG
(3788 bp)

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