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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14872_c0_seq2
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:39.41 TPM:42.49
ORF EntryO_BomoOtmSK14149_complete:A_BomoOtmSK_comp14872_c0_seq2
Sequence
(Nucleotide)
TATTATTTTATTTATTATTACTAACAATATGAAATATATGTTAATTAAAATCGTTTCAGC
AAATTCATTAAAATATTTTAATAACATGCTGTACGTTCAATGAAATTTTTCTTAGAAGTC
AAATAGAAAAAAAACCGAACACTAATCGGATCCAGAAACACTAGTTTGTTTCTTCATCGA
CTTCAATGCTCTCTCTCTCAGTTTCTTTTCCAAATCTTCGTTATTAACTTTTCCTTCTTC
CTCTTCTTCCTCGGCTTCATCGCTATCAGAAGAATCCTCTTTTTTCTTTGATGATTTCTT
ATGCTTCTTGTGTTTCTTATGCTTTTTAGAATGCTTCTTATGTTTCTTATTTTTCTTGGA
TTTCTTAGGTTCATCACTGTCTGAATCTGACTCTGAGTCTGTTACCTTCTTCCTTGCTTT
CTTCTTTGACACCTGGTCACTTTCAGAAGAGGACTCTTCCTTTTCCCTCTTTTTAGGTTT
TTTTCGTTTTCGTCACGAGATTTAGGTTTAGCATCGTCTACTTTCACTTTTGCTGGTTTA
TCCTCTACTTTCTTTAATTTAGCAACTTCTGGTGATAAGGCTTTTTCCTTAATAGAGTCA
GTTTTTTTACCGCGTTTTGGGTCTTTTTCTGAACTAGAAGTATCACGTTTAGGGTTTTTC
TTCTTAGATTTTGCATCAGTATCCGAACTATCATCTTGGGAATCCTCAGAATCGACTTTT
TTGGACTTGAGCTTGTTTTCAACTTTCTCAGACCTTGACCTTTCGCTACTCGCATCCTTG
GCGCGTTTTTTAGACTTCTTATCAACATCAGATTCGTCGACGACATTTTTTTGTTTTGTC
TTTGAAGCCTTGTGTTTAACTTCTTCTTCCGAACTGGAGTCGGAGCTCGACGAGCGAGCT
CTTTTCTTTCTTGATTTCTTGGCCAACTTCTTTTTAGCATTCTTTTTGCTTTTCTTCTTC
CTATCTTCTTCAGATTCACTAGAAGAAGATTCCTCAGAATCGCTATCGCTAGAAGAGCTC
TCTTTTTTGAGTTTCTTATTTCTCTTAGATGTACCCTTCTCCTTACGCTTGATTTTGGAC
TTACTTTTGGATTTCGATAGCTCCTCGCTACTCGCACTTTCAGAATCTGATTGATGGGCT
TTACGTTTAGCTCTTTTGGATTCCTTGGTTTTTATTTCGTCCTCATTCTGCTCTTTTCCC
GAAACTTCATCAGATTTCTTATTTTTGTCAATTTCATGTCTTCGCAAGAACGGTGATGGA
GTGCGTGAAAGACTTTTTGAGTATTCACGCAGGTTTGGAATATTTACAATATCTTCTTTC
TCTTCGTCGTCAGTGTGGTCTGACTGGGTTTTTCCGTCATTAAAAGGTTCTGGTGGGGGT
TTTTCAACAGCTACTGATGATTCTCGGCTTGTGCTAGATATAATGCGCTCTTTAGATTGC
TCACGCGGAATAGGCAGGTGCTCAGGCTTTTTGGGTAATTTGTCATTATTTTCTTTTCTC
GGAATCGAGACAGATTTCTCTAAACGCTCCTTGATAATATCGCTAGACCTTCTATCGCGA
GATTTCCTGTCCCTGGATCTCCTGGAGCGATCGCGCGATTTCCGCTCTCTGGACTTATCT
CGTGAGCGGCGGTCTTTGGAGCGGCGATCACGTGAGCGTCGGTCGCGTGACCTGCGTCCT
GAGCGACGCCTCGACCGCGACCTGCGACGTGAACGGGAGCGGCGACGGTCTCGAGACCTG
TCTCTTGAACGTCGTCGAGAGCGTGAACGCGACCGTCTGCGTCTTTCAAGCGATCGTCGA
CGTTCTCTCGACCTCTCACGCCGTTCTCGTTCACGGCGTCGTCGCTCTCTTTCACGTTCG
CGTTCTCTTTCTCTCTCCCGTTCTCTTTCCCTCTCACGACGATCTAACGACCTACGTCGG
CTGCTCCTACGGCGAGATTTACTCCTTTCTCTTCGGGAGCTGCGCCTAGGGCTAACACTT
GTAGAAGAATCACGATTCGAACGGTATTGTCGTTTTTTATGTGACGATCTCTTCTTCACA
CTGCCACGGGATGAAGCTGAAGACGAGCGTCTTTCGCTAGATGATCGGCGCGACTTATCA
GCAGGTTTCTCATCATTGGTTTTCTCTTTCTCGTCCGTTGACTTAGCAGGTGACACAGAT
CTAGATTTCTGACCTTCAACTTCAGATTTCTCTTCAACGTTCTGTGTTATGGTTGGTTCC
TTGTTTTCATCATTGACAGGTTCATTGACAGTTGGAGAATTATTCTGAACTGGTTCTTCT
TTAACCTCTTCTTCATTCTTTTCTGGTGACTTACCGTTCTCTGCTACACTTGGAGCTTTG
GTTTCCGGTTCAGTTTTCGCAGGGCTGACCTTGTCTCTGATCGGGCTGCTGCGCCGTCTC
GATCGACGCGGACTTCCGCCGTTACGATGCTTTCTGTCACTGGAACGGTCACGAGAACGA
GTTCGGGAGCGCCGTCGGTCGCGAGAGCGGCGCCGGGAACGCGACCGGGACCTCGATCTC
CGTCGCTCCTTGTCTTTGTCCTTGTTCTGCTGCTCCTCCATTCTCTTCTTTATTTCTTCT
TTCTTCTGCTGAGTAAATGATTCGGGTATACCGTTTTCACTGGCCTGCGCGCTCAGCAAC
AGCTCCCATAACTCTCCCATGAAAAGGCGTGCGTTCTTTCCATTTAGGAATCCAGTCAAG
TTGATCTGCATTTTCTTTGGGCATGGGAACTTTTCTTCAAGCTGGTTGGTGACATATTCA
ATGACAACATCATCTTCCATGTTTAGAATTTCTGTTATCTTTTGAGTGATCCACGGCTTC
AGCACGTCGAGCTTCACTTTTGACATGTCAACCTGCTGAGTGAGGCAATCTCCAAACTTC
ATTTGCTTCATCAGCTTCTTCTCCTTGTCACTGAAGCGGGTGTCCTGCTCTGTACTAGTT
CCCGTATACATCATCATCTTGCTAACGGAGAAATCAATACTTCTTCCGGTGTAAATTTGT
GGGGTTATAAGGCCCCGTTGTTAGGCGTGAGGACGCCAATGATAAGTCAAATTGGTTACA
CACAATATAAAATAAATCAGCTACGCAGTTATCGTACAACTATGCCATCGCCATTGCTAA
ATTCACATTTGTTCGCCATTCCGTACAGC
(3149 bp)

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