SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14857_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		protein_grainyhead_isoform_X2_[Bombyx_mori]
Ontology
GO:0003382 P epithelial cell morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007009 P plasma membrane organization
GO:0007399 P nervous system development
GO:0007402 P ganglion mother cell fate determination
GO:0007419 P ventral cord development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007464 P R3/R4 cell fate commitment
GO:0008360 P regulation of cell shape
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042052 P rhabdomere development
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0061024 P membrane organization
GO:0061041 P regulation of wound healing
Transcript
Level		FPKM:12.82 TPM:13.82
ORF EntryO_BomoOtmSK14103_complete:A_BomoOtmSK_comp14857_c0_seq1
Sequence
(Nucleotide)
TTTTTGAAGAAAAAAACATTTTATTTAGATTATAAACTTTGATAAAAATAATTATATTAA
TAATATTTTATGACAACTTACAAATATTCATATAAAAGAATAACGTAACATCTATTTTAT
TTAAAACTTAAGTACAGTAGACATTTATTGACGAATATGTGCTACCACTTTCTGGTTGCC
TTTCAACTGTGACTACGTGTCAAGAGTGCGTTGTGTGCCGCAATGTCAACCTTACGCCCC
CCGCCCCCCCTCCCTTCTCCACATTACCGAACATCCTACAATAACATGCAGTATTCATTT
CAATAATTACACAAATATTATACTCTCATTTAAACATTGCACAACCATTAAAGGGGCTCG
GCTGGCGACACGACAAGCAACGCAGCCATTAATTCACAACGCCTGATTTACGTATTATTG
CTACTGACATTTGTGACTTATGACGAGATTCTGAATCACGATCTAACATCATTGTAAGTA
TACATTAAAGCTGCAATTTATGATAAGTATATAAATAAATACAATTATTGGAATAAGTTT
AAGTAGGTAAAACAATGTTATAGTCCGCCCAACTAGTGGCTAACGCAGACTTTGAGCAAC
GAATGCTTATAAAATACATGTAAAAGAAATAATAATAATATTAAAGAAATATAAAATTGT
GGATACAAATTAACAAGTGTACACGAGCCAAATAATGGAAGAAAGGACATCGAAGGCGAC
GAACAGACGCCGCCAGACGAGTCGCGACAAATAAAATAACACAAAACAAACACATTACAT
ACAAATACGTTGTATATCGATAACATGATCTTAATTTTAAAATTCGATGCATCATACCTC
AAGTCACATTAAAAACTAATATAAAATTATATACTAAAGTCATTAAGTATTCTAAACTAT
GTCATAATATGGCAGTTAAACAAACCGTCTGCACTAGGCACGTTTGTGATTACACCTGGC
GTTTATCTGCGACCGAAGAGATTGACAAATACGAGTATAATACATTACTGAACTGTGTGA
TTGATATAGTATCGGTGGAAGAATATTAAAATATTTCATTCTATTATATATTTCAATTTT
AAAAACGATGTGGTGTTTATTCATCAAATTACGGTGTTTCTAATGAAACTAATATTTTTG
TTGTAGATTACTCTTAAGATAAACTAGACAAACATGTCTGTTTGATATGAAACCTTACGT
GTAAATAAGTCTTGGACACAAATATTATAAAACTAAAATGTTGTCATGGCCAGATAACCT
AATTTTTCGAAATCATTTAAAATAACAATCTAATATCGATTAAAACTTAAAATTATTCAC
AAACCATTCCCGTGGGTAATAATGTTCAGATGGACCATTTTTGTGACTAATTACATATGA
CTATGCGATGAAGTATTTGTGGAAAAAATGTGACTGGAAATCGTGTTTTGTGTTCATTGC
TCTATTAAATGAGTTGTGTGTTGTGAGTTGTATGCATAGTTTACAGGTCAATGTAGAAAA
AAAAGACATATTTTTACCATTCATTTTTTGTAACGTTTTAATTCTTAAAATTGTGTGCGG
CGTGCCTTACGCCCACAGAAGTCCTGTGGTAATTACCAGGGATTGGTTATTTAGGTTTTT
TTAAAATTTCAATGTAAAATAATAAAAGCAATGAACATTATTCAACTTAAATTTCTAATG
TACGTTTTAAAGTACTAAATGATAAAATTGAGCGGGCTTATGAAGCAAACTTAAGCTTAC
AAAACTTAACAAAGTGGATGGCATTTAATATGACTTAACTCACTTATAATAAAGATTTAA
TATAATATTATTATGACAAAGGCACTTTATGCTTTAATGATTTGTGACAAGAGTTCCTTA
TCATCATGGCAAGATTAAAAGGTACCTGTTGAGAGGACAACTAAATTACATCTAATATAA
TAACCGAGTGAATGGCACACACGTTTAATTCAGCAACGGATCATTCATCATTTACAAGAT
GATAATTATCATTCAATATACGCAACTTCTGGATACCAAATACGAATTTCATTTGCCACC
ACCAACAAATTCGATCTCGCTTAATTTCATAAGGCACTATAAAATTATATATATTTACAA
TTCATTTTATCGTAATGTTATGACGAAGACATTTGTGATGTCGAGTTATTTAAAATTAAG
TTAAGATGATGGATCGCTTAAAAGTAAATTTCAATCTGAGATCGACAAACTTATCCCATT
ATAATAGATTTTCGCATGAGTGCTAAAGGGGAATGTTAAAGTTTTTGAACTAAAGTTCGC
ATCAATACGTCGGGAGAGTGTTCATTGTATGAAGAAGGCGGCGCGAAGGCTAATGCTCTA
AGGGCAGTTCCACAAAGATGATGTCGTAGAGCCGTTCGTCGTCTGTGTTACCTGCCGGCA
CTACTTCGAGCAGGAACAGATCTTCGTTGCAGTAATACGCGAGCATGTCATCGTCAATTT
TGGCCGTAATCCCTTTCTTGTTCTTTCGATAAAGATTATTAATGGCCGAACTTGAAATTT
TGTACTTATTCTCAATCGCATGCATGAGTCCCTGCGTGGTGGGGGGCACCACGTGGAGAG
GCGTGTACACGTCCTCCGCGTCTTGCCGCACGTATAGCATCACGCGCTCGCTCAGCGGCG
GCGTGGACGTGCGCGCCCGCTTACCCAGTACACCCTCTAGCTCCAACGAGTCCTTGCGGT
CATAGGGAGATAACGCACCCACCTCCCGGTATCCTGGCGCGTCCGGTGGGAAGTGATTGT
GGAATTTAAGCGCAGGCGCTTGAGGCTTTGCCGCGTGCAGAAGGAAGGGTGAGGCACCCT
TTAGATGCGCTTCTGCTAATGATGCGTCATCATGTCCATAGAAGCCCTGTATGTCCATTC
CGGTCAGTTTCTCGATGTCCTCCGCCGGACTGAACAAAACCGGTGGCTTAGACAAGTCCG
CCATCGAATAGAATTCGCTCCGTTCGGTCACCGGGTGGTATATTTCGTCCAGTTTTTTTC
TGTTTGTGGCCGACATCTTTCTTTTCGCTGCTCTTCTTTCTTCGTCTCTAGTTTTCCTTT
CTGCGCCCTTGTCACAGAAAACTTTAATTTGACAATATCCCCTGTGATAAACTTGTGTGT
CTCGCGGGTCTTCGAAAGTGTCAATTTGAATATGTAATGGAAGACCCTTAACGCCTTTTT
GACTGCTGAAGTCTGTACTTAAACATTGCACTGCAATGTTGATCTTTGCAGCACTCTCCA
ATGGATTCCAGTATACTGCGATGGCGTTGTGAGCGACCTCCTCGATACAACCCGCTAAAC
CGATGCTGTTCTTAGTGTCAGCGTCCAGTATCCTTTGTTTGACAGAGTGCTGCCTCCCGT
GCCAGAATTGCCACGCTTTGATTTCGTCTTCTGGTGATTTCTCTTCTCTGAACATCAGCA
TTACAACGCTCTTTACAGTTTGATTTTTAAGTGGTTTGTCGGGATCGTGTATGTACTCAA
GTGTAATCCCGTAGAACTGGCCCTTGTTGATGTACGTGATACGGTCGTCTTCGCGCCGCT
GTGAACTGCTGCTCGCCGTTTCCAAATGGTATTTGAACCCATATGGGGAAAACAATTTAG
CGATTTGAATTTTATCGGCGTCATTCTGTCTTCCAAAGTCATGCCAGGGTCGCGTGCGTG
GAGCCTGCGCGGGCGAGTGATGTGCCGACGGGGTGCCGCGACCGTCCTCACCAACGCCGG
GCTGCTGCACGGCAGTGTGGTCCCGAGGGGTGACTGCGTCTGCACCGATGCCACTATCCG
GTGATGGTAAGTCCACTGTCAGTCCGGCTGCTGCGATCACGCTCTTGCTGTGATACCGTG
GTGCAGCATATCTTTCGCTAAACGCAGAACCTGAAGCCGGTTCTCCATCATAAGGTGGTG
CAGCTCTCTGCTGGTAGCCTTCTCCGACAAAATATTCTCTGTAGTAAGGTTCACCCGCAA
AAGTCGAAGGCTGTCTTGAATATTGATCGCCATAGGGGGTGGGACTAGGTGTGCCCGGTG
GAGCAAACATTTGGGTGGTATACATCGTTGCGTCCGGAAGTAGTGAACCTGCTGAAGAAG
CTCGCGATGGCACCGGGGACGGCGACGCCGCTTCACCAGGCTCGCCGACCACCACCTGCG
GACACACGCGTCTGTTACACGCGTTCTCCCACGACAACTGTCCGCTTCGTAAAGTAGACG
CGTACATGCCGCGTCTATACACAATTCACAGCTTCACGTACACTAGGTTCTTTCGACCTC
GACACGTTCACAACAACTAATGTAAACAATCCGTGGTAGTGTAGTCTAGAGGGCGCCTGC
GTCGATGCGGTCTGGGCGGGCAGCGCTTGCCGGCCAGATAAGGGCGCGGGCGGGCGCGGC
TAGTGCGATTCGAGCGAGTTGCTCGGCGCATCGTACGCAAACCGCGTTAAATAATACATG
AGTAACTAGTTAGTGTGTGAGTGCGTGCGCGCGCGACGGCGGCGTACGAACGTGTGACG
(4499 bp)

- SilkBase 1999-2023 -