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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp14847_c0_seq3
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		protein_suppressor_of_white_apricot_isoform_X1_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:3.41 TPM:3.68
ORF EntryO_BomoOtmSK13990_3prime_partial:A_BomoOtmSK_comp14847_c0_seq3
Sequence
(Nucleotide)
CTCAATGACAGTATGACAGCGTTGTGTCCATTATTGTTGAAATGCTCACGGAAAATTATC
AAAAATGGCATCAAAATGGACTAGACGTCGTAGTGAAGCCGGTATATTAAGAAAGAATGA
AATCAATGAGAAAAAAGAAGAGTTACTCGTGTTCGGCTATTCATGCAAAATATTCAGGGA
CGATGACAAAGCTTTGTTCATTGACCAAGGGAAACACCTCATTCCGTGGATGGGGGATGA
AACGTTGAAAATCGACAGGTATGATGCAAGAGGAGCCCTACACGATGTGTCAGCATTGGA
AGCCCCGCCGGGAGGATACGACTGGCGGGTGGAGTTAACAAAATCTGAGCTTGATGTGGA
GCAACTATGCGATGATGAACGTTACCGAGCTCTATACACAAATGAAGATGAAGAAGAAAT
GTACAAAGAGGAAGAACTGAAGCGTCTCCATGCGGCTGGTTACGGACAAGTTGGTTTCAA
TTATGATACATTAGCTCCACCTAAGCCACCCGTGAAGCCAGTTGAGGTAGATGAACCATT
TGTTCCGTCTTCAACTCTTGAAACTCTGCTACCTGAAGATATTGTTTTACCTGAGACACA
AAAACTGAATGCCATCATAGAGAAGACAGCCAACTTTATAGCAAGTCAGGGTGTCCAGAT
GGAGATCCTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACAAAGA
CTCACCTTTGCACCCATATTATAGTGCGCTCATCGCACTCATCAAAGCCGGTAAATGGCC
TGAGAAGAAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCCATCC
AAGCTTAGCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACAAGCC
ATCAGCGGACTGCGACTACACGATGCTGGTGTCCAGTCTGGTGGGGCCGCCGCCCGAGGA
GCCTTGTCCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCCACAT
TTCTAAGGAACCCGTCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAGCAGC
ACAGACAACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGGCTGA
AGCACAAGCACGTGCGGAACAAAAAAAAGAAATCATCGTAACCAAATCTACTGGACTTAG
TCTCATGAAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCCGAAGATTCTTC
GTCATCGGACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTTCAGACGGTGAT
CGACAAGATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGCGTTC
GAAAAACGATCCCAGGTTCACGTTCCTGGAGCCCGATCACGAACATCATCCGTATTATAA
AAGATTACTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGAAGAA
TTCTTTGCCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGCCCGATCCTATTTTGCCGAA
ACCGGCTCTGCCTTACGAGTCGAGTACGGACGACGAGAACGAGGAGAAGCAAACGGAGAA
TCAGGAACACATCGAGCCAAAGGATCACACCAAATTAGTCGCTCAGACTCCAAGTGTCCT
GCCGCCTATAGTAGTGTACAAGATGGACGGGTTGATCCACGATTTCCCCGTCGTCAGAAC
GATCGAGCCGGTCAAGCCGACATCCCAAACAAGCCCACCGAAGCTCACGCCAGTCATACA
CGAAGTAAAAGAAATACCTAAAATAGATCCTCCCGGTCTCGTAGAGAAGCCACAACTCGT
CGGACCGGTAACTAATACTTACGTCAAGGAAAACACGCATAAAACAAGAGAAGATAACTC
GGAACGAAGAAAAGAGAGAAAGAAAGATCGCAAGAAAGAATACAAGTCGAAATCTAGGAG
TAGAAGTAGTAAGCGAAGAAGTCCGGTGAGGAATTCCGTGAAAGAGAAAAAACGGGAAAA
AGATGAGAAAGTTAGTAGTAGTAAGAAGAGTGAACCGGTCAAGGAAAACTTTGAGACCGA
AATTATTTCGCTAGAAGACAACGGAGATGATTTGATTGATCTCACCGGCGATCAGTCCGA
CAGTAAACTGGAGGGCGAGGCGGAGCACGGGCGGGAGAGGCAGCGGGAGCGGCGGGGGCG
CGCGGGCGCGGTTCTCCAGAAGGGGGGCGGGGGCCCCGGGGGCCGCGCGCAGACGTGGCA
CGCTGCAAGCACCGGGGCG
(2299 bp)

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